Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju09g1375 ATGGCCGACGACGATTCTCCCCTCTTCACTACCAACGTCTCCGTCATACTCATCGCCTTGGGCTCCGCCGCCTTCGTCGTCACAATGTACCACCTAATTGTCGCTTGCGTCTGCCGCCACCACCTCACTGACCCTAACTCTGACCAGCCGCCTAACGGCGATATTCAGGCATCGTCGAGCTTCATCGACGAGAATTCTTTGGCGCAGCTGATTCCGGCACACAAGTACAAGAACAAGATCGATGGCGACGTCGAAGACGTGGAAGGTGGTCGCGAGGTGACCTGTGCGGTGTGCTTGGGAGATTTCGAGGAAGGCGAAGAGGTGAGAACGTTGCCGGAGTGCTCGCACTCTTTTCACGTGCCTTGCATCGATACATGGCTCTTGTCTCACCCGAATTGTCCCGTCTGCCGCGCCGATGCCGCGCCGTCTCTGGTGGTTCTGAACACCGTGTCGGAGCCTGTTGCCGGTGAATCAAATTCGATGGCGACTGACCACCGGATAAACATTGTGCAAAATGCTTTGATGCAGAGTGTCATGTTGCGACGGTGA 549 0.561 MADDDSPLFTTNVSVILIALGSAAFVVTMYHLIVACVCRHHLTDPNSDQPPNGDIQASSSFIDENSLAQLIPAHKYKNKIDGDVEDVEGGREVTCAVCLGDFEEGEEVRTLPECSHSFHVPCIDTWLLSHPNCPVCRADAAPSLVVLNTVSEPVAGESNSMATDHRINIVQNALMQSVMLRR 182
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju09g1375 182 ProSiteProfiles Zinc finger RING-type profile. 95 137 IPR001841 -
Alju09g1375 182 CDD RING-H2_EL5-like 95 137 - -
Alju09g1375 182 PANTHER RING-H2 FINGER PROTEIN ATL51-RELATED 9 140 IPR044675 -
Alju09g1375 182 SMART ring_2 95 136 IPR001841 -
Alju09g1375 182 SUPERFAMILY RING/U-box 94 142 - -
Alju09g1375 182 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 68 144 IPR013083 -
Alju09g1375 182 Pfam Ring finger domain 94 137 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju09g1375 Alju-ChrAlju09 37640988 37641536 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju09g1375 15 160 C3H Transcription Factor Family AT5G17600 38.125 3.55e-25 98.2