Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju09g1366 ATGACAGTTCGAGAAGTCTGTGCAAATGGAAGTTGCATGGGAACAGCTGAAGTTGAAGCAAGGCTTGATGAAGAAGATATTCAAGAGGCAGAATCTTCATTGCGAGAAGGGTTATCACTCAATTTTGAGGAAGCAAGAGCACTTCTGGGGAAGTTGGAGTATCAGAGAGGGAACGTGGAAGGTGCTCTTCGTGTATTTGATGGGATTGATCTCCAAGCTGCCATACAGCGATTGCAGCCTTCCCTTCCTGAAAAACCATTTACCAAGAAGGGGCGCAATCGTTCTGAACCACCGCCTTCAGTCTCTCAGCATGCTGCTAGTTTGGTGCTTGAAGCCATCTACTTAAAAGCGCGCTCCCTACAAACTCTAGGGAGATTAACTGAAGCTGCAAATGAATGCAAAAGCGTGCTTGATGCTGTTGAGAAGATATTTTATCAGGGTATACCTGATATTCAAGTGGACAATAGATTGCAAGAGATAGTCAGCCATGCTGTAGAGCTCCTTCCAGAGCTTTGGACACTGGCTGGTTGCTATCATGAGGCAATACCTGCCTATAGGCGTGCCCTTCTTAGTCATTGGAATCTAGATGATGATTGCTGTGCAAGAATCCAGAAAAATTTTGTTGTATTTTTGTTGTACAGTGGGGTAGAGGCTAGCCCACCCAGTTTAGGGGTTCAGGTTGATGGGGCGTATGTACCTAAAAATAATTTGGAGGAGGCAATTCTGCTTCTTATGATTCTTATCAGAAAGTTTTGCATTGGTAAGGCCAAATGGGACCCATCAGTGATGGAACACCTGACTTTTGCACTTTCTGTATGTGGCCAAACCTCCGTTTTGGCTAAGTCACTTGAAGAGCTAATGCCTGGAGTATATAGTCGGATTGATCGTTGGAATTATTTAGCTTTATGTCATAGTGGAGCTGGTCTTAACAAAAGTGCTTTGAATCTACTGCGGAGGTCTCTGGACAATCATGCTCGACCAGGCGAGGTTATTTCACTGCTATTGGCTGCCAGGATCTGCAGTGATGATCCTCAACTTGCTCCTGAGGGAGTAGGTTATGCACAAAGGGCAATCACAAGTGCTCAGGGACCAGATGAGCATCTTAAAGGAGTGGGTTTCCGAATGTTGGGACTTTGTCTTGGTAGGCAAGCGAAGGCTGCTTCCTCAGACTCTGAGAGGTCTCACCTTCAGTCCAAAGCTTTGAAATCATTGGAGAAGGCAGTGGGATTGGAGCCAAAAAATTCTGATCTGACTCTTGAGTTGGCTGTTAAATATGCAGAGTATCGAAATTTGACCACTGCTTTGTGCTATGCGAAGAAATTATTTGATGAAACAGGTGGCTCTGTATTAAAAAGTTGGAGAATGCTTGCTCTCGTTTTGTCTGCTCAACAAAGATTTTCAGAGGCTGAGGTGGTAATAGATGCAGCTCTTGATCAAACTACAAAATGGGAACAGGGGCCACTACTTAGGCTGAAAGCAAAGCTGAAGATCTCCCAATCACAGCACACGGATGCTATTGAAACATATCGGTACCTCCTTGCATTGGTTCAAGCCCAGAGAAAATCCTTTGGTTCACTCTTTACTAATTCACAGGTTGATGATGGTAAAGTAAATGAATTTGAGATTTGGCATGGTCTGGCAAGTCTATATGCTAGTCTTTCTCATTGGAAAGATGCTGAAATATGTTTGCAAAAGGCCAAAGTGTCAAAGCCCTATTCTGCAGCATTGATGCACACCAAAGGTGTAATTTTCGAAGGACGTGAAGAAGATCGAGCTGGTCTTGGTGCTTTCTTTAGTGCATTCATGCTTGATCCAAGCTATGTTCCAAGCAAGATCTTGTTGGGCTCTCTGATGCTCAAACTCGGTTCAAACGGTTTGCATGTGGCTAGAGGCTTACTTTCTGAAGCTCTAAGAATAGACCCCACTAACCACAAGGCTTGGTATTATATGGGTATGGTTCACAAAGAGGATGGCCGGATGAGGGATGCTGCTGACTGCTTCCAGGCAGCTTCCATGCTTGAAGAATCGGATCCGATCGAAAGTTTCAGCTCTGTTCTTTGTCCCCAAGTGTAA 2073 0.4448 MTVREVCANGSCMGTAEVEARLDEEDIQEAESSLREGLSLNFEEARALLGKLEYQRGNVEGALRVFDGIDLQAAIQRLQPSLPEKPFTKKGRNRSEPPPSVSQHAASLVLEAIYLKARSLQTLGRLTEAANECKSVLDAVEKIFYQGIPDIQVDNRLQEIVSHAVELLPELWTLAGCYHEAIPAYRRALLSHWNLDDDCCARIQKNFVVFLLYSGVEASPPSLGVQVDGAYVPKNNLEEAILLLMILIRKFCIGKAKWDPSVMEHLTFALSVCGQTSVLAKSLEELMPGVYSRIDRWNYLALCHSGAGLNKSALNLLRRSLDNHARPGEVISLLLAARICSDDPQLAPEGVGYAQRAITSAQGPDEHLKGVGFRMLGLCLGRQAKAASSDSERSHLQSKALKSLEKAVGLEPKNSDLTLELAVKYAEYRNLTTALCYAKKLFDETGGSVLKSWRMLALVLSAQQRFSEAEVVIDAALDQTTKWEQGPLLRLKAKLKISQSQHTDAIETYRYLLALVQAQRKSFGSLFTNSQVDDGKVNEFEIWHGLASLYASLSHWKDAEICLQKAKVSKPYSAALMHTKGVIFEGREEDRAGLGAFFSAFMLDPSYVPSKILLGSLMLKLGSNGLHVARGLLSEALRIDPTNHKAWYYMGMVHKEDGRMRDAADCFQAASMLEESDPIESFSSVLCPQV 690
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju09g1366 690 ProSiteProfiles TPR repeat profile. 644 677 IPR019734 GO:0005515
Alju09g1366 690 SUPERFAMILY TPR-like 489 674 IPR011990 GO:0005515
Alju09g1366 690 Gene3D Tetratricopeptide repeat domain 229 530 IPR011990 GO:0005515
Alju09g1366 690 Gene3D Tetratricopeptide repeat domain 531 683 IPR011990 GO:0005515
Alju09g1366 690 SUPERFAMILY TPR-like 110 507 IPR011990 GO:0005515
Alju09g1366 690 SMART tpr_5 294 327 IPR019734 GO:0005515
Alju09g1366 690 SMART tpr_5 450 483 IPR019734 GO:0005515
Alju09g1366 690 SMART tpr_5 540 573 IPR019734 GO:0005515
Alju09g1366 690 SMART tpr_5 486 519 IPR019734 GO:0005515
Alju09g1366 690 SMART tpr_5 110 143 IPR019734 GO:0005515
Alju09g1366 690 SMART tpr_5 644 677 IPR019734 GO:0005515
Alju09g1366 690 Gene3D Tetratricopeptide repeat domain 15 193 IPR011990 GO:0005515
Alju09g1366 690 PANTHER PROTEIN NPG1 2 683 IPR043376 -
Alju09g1366 690 MobiDBLite consensus disorder prediction 82 101 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju09g1366 Alju-ChrAlju09 37506128 37509380 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju09g1366 3 686 Calmodulin-binding Proteins AT2G43040 71.802 0.0 974