Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju09g1360 ATGTCCATGGATAATAAACCAAAGTCTGATCAGGTCGTTCTCTTCATCGACCACCTCAACGCGAGCCCTCCTTCCAGGGAAATTCATCACAACAACATCAACAACGACACAACCACTACCAACAAGCCCAAACTCACTTCTAGAGTAAAAAAACTCAATCGCCTTAGCTTCTCCAAACCTAAATCTCGCATCCAAGAACACAACCACCCACTACTCTACACCAACTTCGTCCCCGAAGAAGCACAAGACCCTTCCTGTTATTCTTCCACTGACGACGACCACGACGAAGAAGAAGAAGACGAAGACGAAGACGACCAGGCCGAGGAGGACGGCCCTAACTCCCAGAAGAAAACCAAACGTCGTCGTCGCAAGATTCAATGGAAGCGAGTGCTAGAGTGGGCCTTGTTCATCATCATATTAACAAGCTTGGTCTCCTGCATCACCATTCCTTCCATCAAAGCCAAGCACTTGTTGGGTTTAGAGATTTGGAAATGGTGCTTGATGGGAATGGTCACCTTCAGCGGCCGCTTAGTCTCTGGCTGGCTTGTCGCCGTCGCCGTCTTCATCATTGAACGAAACTTCATGCTCAGAGAAAAAGTCTTATACTTCATTTACGGCCTCAGAAAAAGCATCAGAAACTGCATATGGCTTGGCCTCGTCTTATTCTCTTACTGGAGCGTCGTCTTTGACAACATCCAGAAAAAAAACCACAAGTTCCTCAACAAGATGTTTCAGGCCCTCGTCGCCGTCCTCGTCGGAGCCACAATCTGGCTCGTAAAGATCGTGCTGGTGAAAATGCTAGCCTCGTCGTTCCACGTTGTGACCTACTTTGACAGAATGAAAGAGAGCGTGTTCCATCACTATATATTGGACTCACTCTCGGGGCCTCCGTTGGAGGAGAACGAGGAGTCGCCGCATACACTGACGGCGTCGAAGTCGATGCCAGCGAATTGGAAGGAGGGGAACAAGGCGATTAAGGAGGCGAAGAACTTGTACAAGTCGAACAGTTTCGGGTCGAGAAAGATTGATATGGAGAAGCTGAAAGAACTGAGCATGGAGAGCCAGGCGTCGGCATGGAGCGTAAAGAGGCTGGTCAACTACGTGAGGTCGTCGGGGCTGTCAACGATTTCCCGGACCGTCGACGATTTCGGAAACGCCGAGTCGGAAATTTGTAGCGAGTGGGAAGCTAGGAATTGTGCACAGAGGATTTTCAAGAACGTCGCTAAACCTGGTGCCAAGTATATTGAAGAGGAGGATCTATTGAGATTTTTGAAGAGAGTTGAGGTTCATACTATATTCCCATTCTTCGAAGGCGCCCTCGAAACTGGAAAGATCTCCAGGTCTTCGTTTAGAAACTGGGTGATTCGAGCATATTATGAAAGGAAGGCTCTGGCACAATCACTGAACGACACGAAAACTGCAGTGCAACAGCTTCACAAGCTAGCAAGCTCAATAGTGACAGTGATAATCATTATAGTGTTCCTTTTGGTGATGGAGCTGGCTACTATCAAGGTAATACTTTTCGTCATCACACAAATAATTCTTGTTGGTGTTGCCTTCCAGGGCACCTGCAAGACTGTGTTGGAGGCCACCATCTTCGTCTTCATCATGCACCCCTTCGACATTGGAGATCGCTGTGTCATCGACGATGTTCACATGATTGTGGAAGAGATGAATATCTTGACAACTGTGTTTCTTCGATACGACAATGAGAAAATCTACTACCCCAACGCAGTTTTGCTCAACAAGCCAATAAGCAATTTTTATAGGAGCCCAGAGATGTGCGATTCTATTGACTTCGTTCTTGATGTTTCAACACCTATGGAGATCATCATTTCAGTCAAGAAAGCTATTCAAACGTACATAGAGAGCAAGCCGAAGTATTGGAATCCAAAGCACGCGGTGATAGCGAAGGAGATAGAGAATATGGATAAGCTGAAGCTGTGTCTGTGTGTGCAACACACAATAAACCATCAGAACTATGGGGAGAGAACCAATCGGATGACGGAGCTTCTGATGGAGCTGAAGAAGATCTTTGAGGTTCATGGAGTTAAGTACAGTCTTCTCCCTCAGGAGGTCCACATTACCAAGATGAACAGTACCAAAATGGGAGGCCTGTCTTGTAATTAA 2130 0.4681 MSMDNKPKSDQVVLFIDHLNASPPSREIHHNNINNDTTTTNKPKLTSRVKKLNRLSFSKPKSRIQEHNHPLLYTNFVPEEAQDPSCYSSTDDDHDEEEEDEDEDDQAEEDGPNSQKKTKRRRRKIQWKRVLEWALFIIILTSLVSCITIPSIKAKHLLGLEIWKWCLMGMVTFSGRLVSGWLVAVAVFIIERNFMLREKVLYFIYGLRKSIRNCIWLGLVLFSYWSVVFDNIQKKNHKFLNKMFQALVAVLVGATIWLVKIVLVKMLASSFHVVTYFDRMKESVFHHYILDSLSGPPLEENEESPHTLTASKSMPANWKEGNKAIKEAKNLYKSNSFGSRKIDMEKLKELSMESQASAWSVKRLVNYVRSSGLSTISRTVDDFGNAESEICSEWEARNCAQRIFKNVAKPGAKYIEEEDLLRFLKRVEVHTIFPFFEGALETGKISRSSFRNWVIRAYYERKALAQSLNDTKTAVQQLHKLASSIVTVIIIIVFLLVMELATIKVILFVITQIILVGVAFQGTCKTVLEATIFVFIMHPFDIGDRCVIDDVHMIVEEMNILTTVFLRYDNEKIYYPNAVLLNKPISNFYRSPEMCDSIDFVLDVSTPMEIIISVKKAIQTYIESKPKYWNPKHAVIAKEIENMDKLKLCLCVQHTINHQNYGERTNRMTELLMELKKIFEVHGVKYSLLPQEVHITKMNSTKMGGLSCN 709
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju09g1360 709 FunFam Predicted mechanosensitive ion channel 539 588 - -
Alju09g1360 709 MobiDBLite consensus disorder prediction 25 46 - -
Alju09g1360 709 PIRSF Memb_At2g17000 14 705 IPR016688 -
Alju09g1360 709 MobiDBLite consensus disorder prediction 21 46 - -
Alju09g1360 709 SUPERFAMILY Sm-like ribonucleoproteins 530 588 IPR010920 -
Alju09g1360 709 PANTHER MECHANOSENSITIVE ION CHANNEL PROTEIN 5 31 701 IPR016688 -
Alju09g1360 709 Gene3D - 539 588 IPR023408 -
Alju09g1360 709 MobiDBLite consensus disorder prediction 90 109 - -
Alju09g1360 709 MobiDBLite consensus disorder prediction 81 119 - -
Alju09g1360 709 Pfam Mechanosensitive ion channel 483 685 IPR006685 GO:0016020|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju09g1360 Alju-ChrAlju09 37383135 37389385 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju09g1360 7 699 Mechanosensitive Ion Channel Family AT5G12080 42.156 0.0 553