Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju09g1355 ATGGCCAAACTCGTGTTCTGTCTGTCCCACTCCGAGCAGCAGCAGCAAACAAACAAACTCACTGAAAAAATGAGCATTCCGCCGGCGGCCATGTGGACGGGACTCCAGCCTCCGCTGTTCACGGCGGCGCAGTGGACTGAGCTCGAACACCAGGCCCTCATCTTCAAGTATCTCAAAGCCGGATTAACCGTTCCGCCTGACCTCCTCGCTCCTATTCACCGGAGCTTCCAACTGATGATGCCGGTTCCTCATTCAGCTCTGGGTTACAGCTCCTATTTCGGGAAGAAGATAGACCCAGAACCAGGTCGGTGCCGGAGAACCGACGGCAAGAAATGGAGGTGCTCGAGAGATGCACACCCAGATTCTAAGTACTGTGAGCGACACATGATTCGCCGTCGTCATCGTTCAAGAAAGCCTGTGGAAACATCACAAGCTGCTCATCCTCCTCTTCCTCCTCCGCCTCCGCCTCCTGCTGCTCAGTCACCGGAGGTTAGTGGTGGTGGTGGGACCAGAACTGGTGGCGGTGGAAACTCATTTCCCAGCCTACCTCTTCACACAAATGGAACTCGTGAGGGCTTAAACCTCGGAAACAACAACGTATCACAACAGATTCAGATTGAGCCTCTGCCAATTGAGTTGAACAAGAAAGAGTACAGTTTTGGACTGCAATCTGAGGTAGATGAGCATGACTTCTTCCAGCAGAAAGACATGGGAAATGTGAGGTACCTTGGATTTGACTCTTCCTCAGATACTAGCATGTGGTCTCAACTGTCTCACATTTCCCCAAACACTGTCTCTGAGTCGAGCGACAGTTCTGTCATGGCGAGCAACTGCTATCAACTGCAAGGAATGCCGGTGGCTGATGCTGCGCAGCCAGCACCGGCATCAAACAGCATCACCGATGCCGTGACATCATCCAGGCAACTCAGCTTCAGTGCCCAGTTAGGCTCAACTGGTAGCTTGAAACAACAGGACTATCATCAGTCTCCTCCTCAGACTCAGATCAATGGTTGGCCATGGAAGTATAGACCCAATAAGGATGCTGCTGCTAATGGCCCAGATGTGAATGTCGATTGCCGTGGATCTCTGCAGGGTGGCCCTGAGGTTGATGTCCAAGAAGCAGTACCTGAAACTCATAAATTCTCTGATTGCAAAGTCCCACTAGTGATGTAA 1173 0.5175 MAKLVFCLSHSEQQQQTNKLTEKMSIPPAAMWTGLQPPLFTAAQWTELEHQALIFKYLKAGLTVPPDLLAPIHRSFQLMMPVPHSALGYSSYFGKKIDPEPGRCRRTDGKKWRCSRDAHPDSKYCERHMIRRRHRSRKPVETSQAAHPPLPPPPPPPAAQSPEVSGGGGTRTGGGGNSFPSLPLHTNGTREGLNLGNNNVSQQIQIEPLPIELNKKEYSFGLQSEVDEHDFFQQKDMGNVRYLGFDSSSDTSMWSQLSHISPNTVSESSDSSVMASNCYQLQGMPVADAAQPAPASNSITDAVTSSRQLSFSAQLGSTGSLKQQDYHQSPPQTQINGWPWKYRPNKDAAANGPDVNVDCRGSLQGGPEVDVQEAVPETHKFSDCKVPLVM 390
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju09g1355 390 MobiDBLite consensus disorder prediction 98 127 - -
Alju09g1355 390 MobiDBLite consensus disorder prediction 98 196 - -
Alju09g1355 390 PANTHER GROWTH-REGULATING FACTOR 5 16 313 IPR031137 GO:0005634|GO:0006351|GO:0032502
Alju09g1355 390 Pfam QLQ 40 72 IPR014978 GO:0005524|GO:0005634|GO:0006355
Alju09g1355 390 Pfam WRC 99 141 IPR014977 -
Alju09g1355 390 SMART QLQ_2 38 74 IPR014978 GO:0005524|GO:0005634|GO:0006355
Alju09g1355 390 MobiDBLite consensus disorder prediction 320 339 - -
Alju09g1355 390 ProSiteProfiles WRC domain profile. 98 142 IPR014977 -
Alju09g1355 390 MobiDBLite consensus disorder prediction 320 340 - -
Alju09g1355 390 MobiDBLite consensus disorder prediction 145 161 - -
Alju09g1355 390 MobiDBLite consensus disorder prediction 165 196 - -
Alju09g1355 390 ProSiteProfiles QLQ domain profile. 39 74 IPR014978 GO:0005524|GO:0005634|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju09g1355 Alju-ChrAlju09 37333732 37337719 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju09g1355 24 144 GRF Transcription Factor Family AT3G13960 55.118 2.02e-39 143
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRF Alju09g1355 WRC 9.5e-20 No_clan