Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju09g1353 ATGGAACTTGTGGTGACAAGGTCTCATGTTTTGTTCCTAATTGTTATCTCTGCACTTTCTCTCCAGACTGTTAGGTCAAGGAATGACGATGCCCAAGCACTTTTAGCACTCAAATCCTCTATTGATGTTCAAGATACACTTGCATGGTCAGCCGAAAGCAAAAATCTCTGCGACTGGGAAGGAGTCAGAGATTGCTTCAAGGGAAGAGTCCGAAAGCTAGTGCTTGAGAACTTGAACTTAACAGGTAATTTGGACCCAAAGATCTTGAACCGATTGGACCAAATTCGAGTGCTCAGTTTCAAGAGCAACTCGCTGTCTGGTCCAATCCCAGACCTCTCTGCCCTGGTTAATCTCAAATCCATATATCTCAATGACAACAGCTTCTCCGGCATCTTCCCTGCTTCCATCCCCGGTCTCCACCGTGTTAAAGTCATAGTTCTCTCTGGCAATCGACTCTCTGGCAATATCCCGTCGTCGCTACTCAAACTCCGGCGTCTCTACATGCTTTACTTGCAAGACAACTCGTTCACAGGACCCATCCCGGGTCTCAACCAAAGCAGTCTCCGATACCTGAACGTCTCCAACAACCAACTTTCCGGCGGGATCCCGGCGAGCTCGGCATTGATCCGTTTCAATGAGTCGTCGTTTTCAGGGAACCCGGGCCTGTGTGGGGAACAGATCCACAAGGCATGCGAAACGCCTCCGTCGGTAAGCCCGGGTTATCCATTGGTGCCAAGGAGGACGGAACCAAGGTCGTCGTCGTCATCTAACCGGAAGAAAGTGATAAAGATAGTAGGAGGGGCCATCGGAGGCTTGGTGGTGGTTGTGATATGCTTGGTTGTAATATGTATGATGTGTAGGAATCACGGAGAAGAGAAGGGTCCAAGAAGCAGGAAGAAAGGAGGAGAAGAGGGGGAAGGAACAGAGACAAGAGCAGGAACGGGAGGTGAAAGTGGCAGAGGAGGTAATAATGGTGGAAAAGAAGGGGGGTTTTCATGGGAAGATGAGGGACTAGGGAAGTTGGTGTTCTGCGGGACAGGGGATAGTTATAGGTTGGAGGATTTACTGAAAGCGTCGGCGGAGACATTGGGGAGGGGTAGTATGGGAAGTACATACAAAGCAGTGATGGAGTCAGGGTTTATAGTGACGGTGAAGAGGTTGAAGGATGCGAGGTATCCTAGCATGCAGGAATTCACAGCTCACATGGAGTTGCTAGGCAGGCTTAGGCACCCTAATCTGGTCCCACTTCGAGCTTATTTCCAGGCTAAGGAGGAACGCCTTCTTGTTTATGATTACTTCCCCAATGGCAGCCTCTTCTCTCTCGTCCATGGATCAAAAACTTGTGGTGGGGGAAAGCCTCTTCATTGGACTTCATGCCTCAAAATTGCCGAAGACCTAGCAACTGGACTTGTGTACATTCACCAGAACCCTGGCCTAACCCATGGCAACCTGAAATCTTCTAACGTGTTGTTGGGTCCGGACTTCGAGTCATGTCTTACAGATTATGGCCTCCAGGTGTTGCTTAATCCGGATTCGCTCGAAGAACCCAGCGCCACCACATTATTCTACAGAGCACCGGAGTGCCGTAGCAACCGAAGGTCTCCCACTCAGCAAGCCGATGTATACAGCTTTGGGGTACTTATCCTGGAGCTTTTAACCGGCAAAACACCCTTCCAAGACCTTGTTATGGAACATGGTTCGGATATACCTAGGTGGGTTCGGTCCGTGCGGGAAGAAGAGACAGAGTCCGGGTCTGGGGACGACCCTGCCTCAGGAAATGACGCCTCAGAAGAGAAGCTTCAAGCTCTTTTGAACATTGCCATGGCGTGTGTTTCACTAGTACCAGAAAACAGGCCAACAATGAGAGAAGTTTTAAAGATGATAAGAGATGCAAGAGCAGAGGCTCAATTGTCCTCAAACAGCAGCGATCATTCTCCAGGAAGATGGTCAGATACTGTGCAGAGCTTGCCTCGTGAAGAGCATTTGAGCATCTGA 1995 0.4957 MELVVTRSHVLFLIVISALSLQTVRSRNDDAQALLALKSSIDVQDTLAWSAESKNLCDWEGVRDCFKGRVRKLVLENLNLTGNLDPKILNRLDQIRVLSFKSNSLSGPIPDLSALVNLKSIYLNDNSFSGIFPASIPGLHRVKVIVLSGNRLSGNIPSSLLKLRRLYMLYLQDNSFTGPIPGLNQSSLRYLNVSNNQLSGGIPASSALIRFNESSFSGNPGLCGEQIHKACETPPSVSPGYPLVPRRTEPRSSSSSNRKKVIKIVGGAIGGLVVVVICLVVICMMCRNHGEEKGPRSRKKGGEEGEGTETRAGTGGESGRGGNNGGKEGGFSWEDEGLGKLVFCGTGDSYRLEDLLKASAETLGRGSMGSTYKAVMESGFIVTVKRLKDARYPSMQEFTAHMELLGRLRHPNLVPLRAYFQAKEERLLVYDYFPNGSLFSLVHGSKTCGGGKPLHWTSCLKIAEDLATGLVYIHQNPGLTHGNLKSSNVLLGPDFESCLTDYGLQVLLNPDSLEEPSATTLFYRAPECRSNRRSPTQQADVYSFGVLILELLTGKTPFQDLVMEHGSDIPRWVRSVREEETESGSGDDPASGNDASEEKLQALLNIAMACVSLVPENRPTMREVLKMIRDARAEAQLSSNSSDHSPGRWSDTVQSLPREEHLSI 664
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju09g1353 664 Gene3D Phosphorylase Kinase; domain 1 348 432 - -
Alju09g1353 664 Gene3D Ribonuclease Inhibitor 27 184 IPR032675 -
Alju09g1353 664 Pfam Leucine rich repeat N-terminal domain 28 63 IPR013210 -
Alju09g1353 664 Pfam Protein kinase domain 360 626 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju09g1353 664 SUPERFAMILY L domain-like 27 224 - -
Alju09g1353 664 MobiDBLite consensus disorder prediction 635 664 - -
Alju09g1353 664 Pfam Leucine Rich Repeat 187 205 IPR001611 GO:0005515
Alju09g1353 664 Pfam Leucine rich repeat 117 175 IPR001611 GO:0005515
Alju09g1353 664 MobiDBLite consensus disorder prediction 573 594 - -
Alju09g1353 664 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 12 634 IPR046959 -
Alju09g1353 664 Gene3D Ribonuclease Inhibitor 185 234 IPR032675 -
Alju09g1353 664 Gene3D Transferase(Phosphotransferase) domain 1 433 651 - -
Alju09g1353 664 SUPERFAMILY Protein kinase-like (PK-like) 361 638 IPR011009 -
Alju09g1353 664 MobiDBLite consensus disorder prediction 291 331 - -
Alju09g1353 664 MobiDBLite consensus disorder prediction 291 307 - -
Alju09g1353 664 MobiDBLite consensus disorder prediction 234 257 - -
Alju09g1353 664 ProSiteProfiles Protein kinase domain profile. 357 637 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju09g1353 664 FunFam Nuclear pore complex protein NUP107 27 182 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju09g1353 Alju-ChrAlju09 37304462 37306769 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju09g1353 4 664 Receptor kinase-like Gene Family AT1G60630 60.593 0.0 778
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Alju09g1353 Pkinase 1.5e-36 CL0016