LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Alju09g1335	ATGGCGACGACTGTAAGCAATCATTTCACTTGCAATAAGCCTCAATTCGCCAGCCGTCGTACTTGGTATTCACCAGAAACAGGAATTTACACTAGCAAACACGCTCCGTTGGAGCTTCCTTCAAACCCATTTCTTGATGTTGTTTCTCACATTTTTTCTCACCAACACAATGGGGTTTTAGCTCTCATAGATTCTTCATCTGCATGTTCAATTTCTTACTCGGACTTGTTTCCTCTGGTCAAATCCACGGCATTTGGTCTCCACAAAATGGGCGTGTCACAAGGTGACGTTGTACTTCTTCTAATTCCTAATTCCATTTTCTATCCCATTGTTTTCTTGGGTGTTTTGTATCTTGGCGCAATCGTCACACCATTGAATCCTCGAAGTCACATATCAGAAATCCATAAACAAATTGCTGAATGTGGTGTGAGTATGGCTTTTACTTCACAGGAAAAAGTTAGAAAGCTACAACCATTGGGCATTCCAGTTATTGGAGTCCCTGGAAATTTCAAGGATTTGAAATGCTCTGATTACTCAGTTTTTTATAACCTTGTTTCTGGTAACTCGGGTTTGTTTCCGAGGCCGGTTATTAAACAAGAAGACAAGGCGGCTATATTGTATTCTTCTGGGACTACGGGTGCGAGCAAAGGAGTCGTTCTAACACATAAAAATTTTGTGTCTGTGGTTGAGCTTTTCGTGAGGTTTGAAGCTTCTCAATATGATTATTCAAGCTCGAAGAATGTGTTCCTAGCGGTTCTGCCAATGTTCCATATATATGGTTTATCACTCTTTGCAACAGGATTACTGTCTTTGGGCTCTACGATTATTGTAATGAAAACATTTGGCATCAATGAGGTGATTAAGGTGATTGATAATTACAGAGTCACACACTTCCCTGTTGTTCCACCAATATTGACGGCATTGACAAAGAGGGTAACCAATATAAATAGGAGTTATCTGCAAAGTTTGATACAGGTCTCCTGTGGTGCAGCACCTTTGAGCATAAAAAATATAGAGGACTTCATCCACACTCTACCTAACGTTGACTTTATACAGGGTTATGGAATGACTGAGTCGACTGCAGTAGGAACACGTGGCTTCAATACTGAAAAGTTTCGAAATTATTCTTCTATAGGGTTGTTAGCTCCCAATATGGAAGCAAAAGTAGTTGATTGGAAAACTGGTGCTTTTATGCCTCCAGGCAGTAGTGGATACTTGAATAATAAGGAAGCGACAATGTCAACAATTGATAAAGACGGTTGGCTTCACACTGGTGATGTTGCTTATGGTCTGAATGGTATCTTCGGATCTATTCTTTGCTCCATTCCTGTTATTAGACAAAGCTTGCTTGCTGTTGTTGGCTGA	1365	0.4037	MATTVSNHFTCNKPQFASRRTWYSPETGIYTSKHAPLELPSNPFLDVVSHIFSHQHNGVLALIDSSSACSISYSDLFPLVKSTAFGLHKMGVSQGDVVLLLIPNSIFYPIVFLGVLYLGAIVTPLNPRSHISEIHKQIAECGVSMAFTSQEKVRKLQPLGIPVIGVPGNFKDLKCSDYSVFYNLVSGNSGLFPRPVIKQEDKAAILYSSGTTGASKGVVLTHKNFVSVVELFVRFEASQYDYSSSKNVFLAVLPMFHIYGLSLFATGLLSLGSTIIVMKTFGINEVIKVIDNYRVTHFPVVPPILTALTKRVTNINRSYLQSLIQVSCGAAPLSIKNIEDFIHTLPNVDFIQGYGMTESTAVGTRGFNTEKFRNYSSIGLLAPNMEAKVVDWKTGAFMPPGSSGYLNNKEATMSTIDKDGWLHTGDVAYGLNGIFGSILCSIPVIRQSLLAVVG	454

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Alju09g1335	454	Pfam	AMP-binding enzyme	55	429	IPR000873	-
	Alju09g1335	454	SUPERFAMILY	Acetyl-CoA synthetase-like	42	430	-	-
	Alju09g1335	454	ProSitePatterns	Putative AMP-binding domain signature.	205	216	IPR020845	-
	Alju09g1335	454	Gene3D	-	29	432	IPR042099	-
	Alju09g1335	454	PANTHER	LONG-CHAIN-FATTY-ACID--COA LIGASE	24	429	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Alju09g1335	Alju-ChrAlju09	37079549	37081938	Proximal

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Alju09g1335	22	429	Monolignol Biosynthesis Gene Families	AT4G19010	57.210	9.97e-170	487