Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju09g1312 ATGAGAGCACCTCGCATGCGTTGGACTACCACCCTCCATGCTCGCTTTGTCCACGCCGTCGAGCTCCTCGGCGGCCATGAAAGGGCAACGCCAAAGTCAGTTCTTGAGCTCATGGATGTCAAGGATCTCACTTTAGCTCATGTTAAATCTCATCTTCAGATGTACCGAACGGTGAAAACCACGGATAAAGCAGCCGCTGCTTCCTCAGGGCAATCTGATGTATATGATAATGGATCATCCGGAGATAATTCTGAAGATTTCATGTTTGACATGAACAATTCATCAAGAAGGTCTGATGTATCTACCAAGCAAGCAAAAGAAGGTGTTAATCGTGATAGAGAACATCATGGGCTTTGGAGCAACTCTTCCAGGGAAGCTTGGTTGCATGGGAAGCCAAAGCTGGATTATTGTGCAGGAAACTTGAGTTCTTTTGAGAAGGAAATGGATCCAAAATGCCTAAGTTACGAGAGAGTATCAGATGGAAGTGCATCGTCAGATGTTTCAGGAACAAGCCCCAAGAAACCAAATTTAGATTTGGAGTTTAGCTTAGGGCAGCCACTTTGA 564 0.4539 MRAPRMRWTTTLHARFVHAVELLGGHERATPKSVLELMDVKDLTLAHVKSHLQMYRTVKTTDKAAAASSGQSDVYDNGSSGDNSEDFMFDMNNSSRRSDVSTKQAKEGVNRDREHHGLWSNSSREAWLHGKPKLDYCAGNLSSFEKEMDPKCLSYERVSDGSASSDVSGTSPKKPNLDLEFSLGQPL 187
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju09g1312 187 MobiDBLite consensus disorder prediction 158 172 - -
Alju09g1312 187 Pfam Myb-like DNA-binding domain 5 56 IPR001005 -
Alju09g1312 187 SUPERFAMILY Homeodomain-like 2 58 IPR009057 -
Alju09g1312 187 MobiDBLite consensus disorder prediction 100 117 - -
Alju09g1312 187 FunFam Myb family transcription factor 2 60 - -
Alju09g1312 187 MobiDBLite consensus disorder prediction 65 117 - -
Alju09g1312 187 MobiDBLite consensus disorder prediction 157 187 - -
Alju09g1312 187 MobiDBLite consensus disorder prediction 65 99 - -
Alju09g1312 187 PANTHER TRANSCRIPTION FACTOR KAN2-RELATED 1 186 IPR044847 GO:0000976|GO:0006355|GO:0010158
Alju09g1312 187 Gene3D - 3 60 - -
Alju09g1312 187 NCBIfam myb-like DNA-binding domain, SHAQKYF class 4 57 IPR006447 GO:0003677
Alju09g1312 187 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 1 60 IPR017930 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju09g1312 Alju-ChrAlju09 36826506 36830516 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju09g1312 1 186 G2-like Transcription Factor Family AT4G17695 51.579 2.61e-47 155
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Alju09g1312 Myb_DNA-binding 5.7e-06 CL0123