Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju09g1289 ATGGTTGGTAGAACAACTGTCATAGTGGCGCACAGACTTTCTACAATTATGAATGCAGATATGATTGCTGTTGTTCAGGGAGGGAGAATTGTAGAAATTAATAACCATGAGGAGCTCATTTCTAACCCAAATAGTGTATATGCATCTCTCGTTCAACTCCAGGAGAAAGCTTCTTTGCAAAGCCACCAGCCAGAGGGTCCTACTCCTAGTGTGGCACCAAGGTACTCAAGAGAATTGTCCTGTACAACAAGCCTTGGTGGCAGTTTTCGGTCAGATAAAGAGTCTTTAGGCCGTGTTTGTACTGATGAAGTGGAAGGTGTAGCAAAGTCAAGTCATGTTTCTGTAAAAAGACTGTATTCAATGATTGCACCTGACTGGTTTTATGGGGTTTTTGGCACCTTTTCTGCATTTATTGCCGGAGCTCAAATGCCACTTTTTGCTCTTGGAATTTCTCATGCTCTTGTATCATACTATATGGACTGGGATACAACACGCCATGAGGTTAAAAGAATCACTTTTCTATTCTGTGGGGCAGCAATAGTGACTGTTATTGTCCATGCCATTGAGCATCTTTCTTTTGGAATAATGGGAGAGAGACTTACTCTTCGCGTGCGAGAAATGATGTTTTCTGCTATTTTGAAAAATGAAATTGGCTGGTTTGATGATACAAACAACACAAGTTCAATGCTGTCATCACGTTTAGATATGGATGCAACTTTATTCCGAACTATAGTTGTTGATCGGTCTGCGGTTCTCTTACAGAATGTTGGTCTGGTTGTTGCTTCATTTATTATTGCCTTCATGCTGAACTGGAGATTAACACTAGTTGTCTTGGCCACATACCCTTTGATCATCAGTGGTCACATCAGCGAGAAACTTTTCATGAAAGGCTTTGGTGGCAACTTGAGCACGGCATATCTGAAAGCCAACATGCTGGCTGGAGAGGCTGTCAGTAACATACGTACTGTTGCTGCATTCTGCTCTGAAGAAAAGGTCCTAAAACTTTATGCTAATGAGCTTGCCGAGCCTTCTAAGCTTTCGTTTAAACGGGGACAAATTTCAGGCATACTCTTTGGCATTTCACAGTTCTTCATTTTCTCTTCTTATGGCCTTGCCTTGTGGTATGGTTCTGTTTTGATGGAAAAGGAGCTGGCTAGCTTCAAATCCATCATGAAGACATTTATGGTTCTAATTTTAACTGCATTGGGCATGGGGGAGGCGTTGGCACTGGCCCCAGACCTTTTGAAAGGGAATCAAATGGTTGCTTCAGTTTTTGAAGTGATGGATAGAAAGCCAGGAATGATGGCCGATGCCGGAGAAGAGCTTAAGATGGTGGAGGGAACAATCGAGCTAAAAGGCATCCATTTCAGTTTCCCATCAAGGCCTGATGTAGTGATTTTTAAAGATTTTAATCTGAAAGTGCCTTCAGGCAAGAGTATTGCCTTAGTGGGACAAAGTGGTTCTGGTAAAAGCTCTGTCATCTCTCTTATACTCAGATTTTATGATCCATCGTCTGGGAGAGTGATGATTGATGGAAAAGACATTAGGAGACTCCATTTGAAGTCTCTGAGAAAGCATATTGGTCTTGTGCAACAAGAACCTGCGCTTTTTGCAACATCAATCCATGAAAACATTCTGTATGGAAAGGAAGGAGCTTCTGACTCAGAGCTAATTGAAGCAGCTAAGCTTGCCAATGCTCACAGTTTCATCAGTTCTCTCCCGGACGGCTACAGCACCAAAGTGGGCGAACGAGGAATACAACTCTCCGGTGGCCAGAGACAAAGGGTAGCCATAGCCAGAGCTGTTCTAAAGAATCCAGAAATCTTGCTACTAGATGAAGCCACTAGTGCACTTGATGTGGAATCTGAGCAAGTGGTGCAGCAAGCTCTGGACAGATTGATGAAAAACAGGACAACAGTTATGGTGGCACACAGGCTATCAACAATAAGAAATGCAGATCAAATCTCAGTTCTGCAGAACGGTAAGATAATAGAGCGAGGGACTCATTCAAGTCTCATAGAGAACAAAAATGGAGCATATTTCAAATTAGTCAATCTTCAACAACACCAGCGAGTATAA 2079 0.4247 MVGRTTVIVAHRLSTIMNADMIAVVQGGRIVEINNHEELISNPNSVYASLVQLQEKASLQSHQPEGPTPSVAPRYSRELSCTTSLGGSFRSDKESLGRVCTDEVEGVAKSSHVSVKRLYSMIAPDWFYGVFGTFSAFIAGAQMPLFALGISHALVSYYMDWDTTRHEVKRITFLFCGAAIVTVIVHAIEHLSFGIMGERLTLRVREMMFSAILKNEIGWFDDTNNTSSMLSSRLDMDATLFRTIVVDRSAVLLQNVGLVVASFIIAFMLNWRLTLVVLATYPLIISGHISEKLFMKGFGGNLSTAYLKANMLAGEAVSNIRTVAAFCSEEKVLKLYANELAEPSKLSFKRGQISGILFGISQFFIFSSYGLALWYGSVLMEKELASFKSIMKTFMVLILTALGMGEALALAPDLLKGNQMVASVFEVMDRKPGMMADAGEELKMVEGTIELKGIHFSFPSRPDVVIFKDFNLKVPSGKSIALVGQSGSGKSSVISLILRFYDPSSGRVMIDGKDIRRLHLKSLRKHIGLVQQEPALFATSIHENILYGKEGASDSELIEAAKLANAHSFISSLPDGYSTKVGERGIQLSGGQRQRVAIARAVLKNPEILLLDEATSALDVESEQVVQQALDRLMKNRTTVMVAHRLSTIRNADQISVLQNGKIIERGTHSSLIENKNGAYFKLVNLQQHQRV 692
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju09g1289 692 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 442 687 IPR027417 -
Alju09g1289 692 CDD ABC_MTABC3_MDL1_MDL2 449 687 - -
Alju09g1289 692 Gene3D - 2 67 IPR027417 -
Alju09g1289 692 Gene3D - 439 688 IPR027417 -
Alju09g1289 692 Gene3D ABC transporter type 1, transmembrane domain 346 689 IPR036640 GO:0005524|GO:0016020
Alju09g1289 692 PANTHER ABC TRANSPORTER B FAMILY 1 57 IPR039421 -
Alju09g1289 692 FunFam ABC transporter B family member 1 109 417 - -
Alju09g1289 692 SMART AAA_5 476 662 IPR003593 GO:0016887
Alju09g1289 692 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 130 416 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Alju09g1289 692 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 449 685 IPR003439 GO:0005524
Alju09g1289 692 ProSitePatterns ABC transporters family signature. 588 602 IPR017871 GO:0005524|GO:0016887
Alju09g1289 692 Pfam ABC transporter transmembrane region 131 401 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Alju09g1289 692 Pfam ABC transporter 468 616 IPR003439 GO:0005524
Alju09g1289 692 SUPERFAMILY ABC transporter transmembrane region 116 432 IPR036640 GO:0005524|GO:0016020
Alju09g1289 692 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 2 54 IPR027417 -
Alju09g1289 692 Gene3D ABC transporter type 1, transmembrane domain 68 291 IPR036640 GO:0005524|GO:0016020
Alju09g1289 692 CDD ABC_6TM_Pgp_ABCB1_D2_like 119 432 - -
Alju09g1289 692 FunFam ABC transporter B family member 4 439 691 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju09g1289 Alju-ChrAlju09 36542256 36545594 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju09g1289 1 688 Calmodulin-binding Proteins AT2G36910 45.798 0.0 627