Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju09g1277 ATGGCTCTGCTTGAGACTCTTTCGTCTAGTGAGCTTTACAACTTCATCATCCATGAGACTATCTCTGCAACCCCATTTAGCAGCCATTGTGATTCCTCCCCTGAAGCTAATGTCTTGTTGGAAAACAGAGCAATGAATCCTCTGGAACATGACCCTGCACAATCGTTTGGTAATGTTCTCTCTTGTTCAAGGAAACGCCATTCCGATGAGCTTGAAGTTCCTGTGGTTGTGCAAGGGAGGAAGAAGAGGAGAAGGAAGCCAAGAATTTGTAAGAACAAAGAAGAAGCTGAGACTCAGAGAATGACTCACATTGCCGTCGAAAGAAACCGCCGCAAGCAGATGAATGAGCACCTCGCCGTCCTCCGCTCACTCATGCCTGAATCCTACGTCCAAAGGGGTGACCAGGCCTCTATTGTCGGTGGTGCTATAGAATTTGTGAAGGAGCTTGAACATTTGTTGCAATCACTTGAAGCTAAGAAGTTGCAGATTCTGCAACAAGAAGTAGTAGCACAAACTAATAATGAAGACTCTTGTTCTTCATCTTCTTCTTGTTCTGCTTCTTCCATTTTCAAACTCATGAGTCCTCCATTTTCACAATTCTTTGCGTATCCTCAGTACACATGGTCTCAGGCTCCAACCAAATACCCTTCCAAGACTAAGGCGGCCGTAGCTGATATTGAGGTTACTTTGATAGAGACACATGCAAACCTTAGAATCCTGTCAAGGAGAAGCCCCGGGCAATTGTCAAAACTGGTCTCTGCCTTTCAAACACTCTGCCTCACTATCCTTCATCTTAATGTCACCACCATTGACCCTTTGGTGCTTTATTCTATCAGTGCCAAGGTTGAAGAAGGATGCGACCTTGGTTCAGCGGAGGATATAGCAACAGCAGTTCATCACTTGCTCAGAAGAGTTGAGGAAGAAGCTTCCCTATGCGGTTGA 942 0.4533 MALLETLSSSELYNFIIHETISATPFSSHCDSSPEANVLLENRAMNPLEHDPAQSFGNVLSCSRKRHSDELEVPVVVQGRKKRRRKPRICKNKEEAETQRMTHIAVERNRRKQMNEHLAVLRSLMPESYVQRGDQASIVGGAIEFVKELEHLLQSLEAKKLQILQQEVVAQTNNEDSCSSSSSCSASSIFKLMSPPFSQFFAYPQYTWSQAPTKYPSKTKAAVADIEVTLIETHANLRILSRRSPGQLSKLVSAFQTLCLTILHLNVTTIDPLVLYSISAKVEEGCDLGSAEDIATAVHHLLRRVEEEASLCG 313
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju09g1277 313 PANTHER MAX DIMERIZATION, MAD 50 309 - -
Alju09g1277 313 CDD bHLH_AtFAMA_like 101 160 - -
Alju09g1277 313 SMART finulus 104 155 IPR011598 GO:0046983
Alju09g1277 313 Coils Coil 146 166 - -
Alju09g1277 313 Gene3D - 90 167 IPR036638 GO:0046983
Alju09g1277 313 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 98 149 IPR011598 GO:0046983
Alju09g1277 313 Pfam Helix-loop-helix DNA-binding domain 99 150 IPR011598 GO:0046983
Alju09g1277 313 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 97 165 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju09g1277 Alju-ChrAlju09 36384257 36386010 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju09g1277 90 282 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G72210 58.163 2.31e-64 203
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Alju09g1277 HLH 1.2e-10 No_clan