Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju09g1263 ATGGCCTCCGACGCCTTCCCCGACAAGAATGCTGTCTTCAGAAAACTCAAGGCAAAGTCCGATAACAAGATGTGTTTCGATTGCAATGCAAAGAATCCAACTTGGGCGTCGGTTACATATGGGATCTTCCTCTGTATCGATTGCTCGGCAGTTCATCGTAGCCTTGGTGTGCACGTCAGTTTTGTGAGATCTACAAATTTAGACTCATGGACTCCCGAGCAGCTGAGAACAATGAGCTTTGGAGGAAACAACCGTGCACATGTTTTCTTTAAGCAACATGGTTGGACTGATGGTGGAAAAATTGAGGCCAAGTATACATCTAGAGCTGCTGATTTGTATAGACAACTTCTCTCCAAGGAAGTAGCTAAAAGTATGTCAGAGGAGGCAGGTTTACCATCCTCACCTGTTGCTGCTCAGTCTGCACAAATGGCTAATGGACTTCCTGAAGTCAGGACCAATGAACCTGTGACAGAGAACATTGCAGAAAAGCCAGAAATCCCTGAGGGCACTGCTTCCCCTAAAGCTTCTCATACAATAGTTTCCAGTACTATCAAGAAACCTATTGGTGCCAAAAAAGGTGGCAAGAGTGGGGGCCTTGGTGCCAGGAAGCTTACTAAAAAGCCGAGTGAATCTCTATATGAGCAGAAGCCAGAAGAAGCACCTGCTCCTGTTCCTTCCTTATCAAGCCATGCTTCGGCAGCTGGGCCACCCTTGCCATCTCGGTTTGAGTATCTTGAAAATGTTCAGTCATCTGAGTTAAATTCAGGAGGTTCACACGTACTTAATCATGTGGCTCCACCAAAGTCATCGAGCTTTTTTGCTGATTTTGGGATGGATAGTGGCTTCCCAAAACGGTCTGGGTCAAATTCCTCGAAATTGCAAATTCAGGAATCTGATGAAGCAAGGAAGAAGTTCTCAAATGCTAAATCTATTTCCTCAGCCCAATTTTTTGGAGATCAGAACAGAGCTGCAGATGTGGACGGTCAAGCTACTTTGGCTAAGTTCTCGGGTTCAACTGCTATCTCTAGTGCAGATCTTTTTGGTCACTCGTCGGATCCCTCCCTTGATATCAGCGCAAGTGACCTCATCAATCGACTATCTTTCCAGGCTCATCAGGATATCTCTTCCATAAAAAACATTGCCGGAGAGACTGGGAAGAAGCTGAGTTCTCTGGCATCCACTTTGATAACAGATCTTCAGGACAGAATCCTTTAA 1215 0.4543 MASDAFPDKNAVFRKLKAKSDNKMCFDCNAKNPTWASVTYGIFLCIDCSAVHRSLGVHVSFVRSTNLDSWTPEQLRTMSFGGNNRAHVFFKQHGWTDGGKIEAKYTSRAADLYRQLLSKEVAKSMSEEAGLPSSPVAAQSAQMANGLPEVRTNEPVTENIAEKPEIPEGTASPKASHTIVSSTIKKPIGAKKGGKSGGLGARKLTKKPSESLYEQKPEEAPAPVPSLSSHASAAGPPLPSRFEYLENVQSSELNSGGSHVLNHVAPPKSSSFFADFGMDSGFPKRSGSNSSKLQIQESDEARKKFSNAKSISSAQFFGDQNRAADVDGQATLAKFSGSTAISSADLFGHSSDPSLDISASDLINRLSFQAHQDISSIKNIAGETGKKLSSLASTLITDLQDRIL 404
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju09g1263 404 CDD ArfGap_ArfGap2_3_like 8 123 - -
Alju09g1263 404 ProSiteProfiles ARF GTPase-activating proteins domain profile. 10 128 IPR001164 GO:0005096
Alju09g1263 404 Pfam Putative GTPase activating protein for Arf 12 108 IPR001164 GO:0005096
Alju09g1263 404 SUPERFAMILY ArfGap/RecO-like zinc finger 11 123 IPR037278 -
Alju09g1263 404 MobiDBLite consensus disorder prediction 162 240 - -
Alju09g1263 404 Gene3D Arf GTPase activating protein 2 136 IPR038508 -
Alju09g1263 404 FunFam ADP-ribosylation factor GTPase-activating protein AGD10 1 137 - -
Alju09g1263 404 PRINTS HIV Rev interacting protein signature 62 83 IPR001164 GO:0005096
Alju09g1263 404 PRINTS HIV Rev interacting protein signature 22 41 IPR001164 GO:0005096
Alju09g1263 404 PRINTS HIV Rev interacting protein signature 41 58 IPR001164 GO:0005096
Alju09g1263 404 PANTHER ADP-RIBOSYLATION FACTOR GTPASE ACTIVATING PROTEIN 3, ISOFORM H-RELATED 5 404 - -
Alju09g1263 404 SMART arf_gap_3 10 126 IPR001164 GO:0005096
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju09g1263 Alju-ChrAlju09 36234662 36239409 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju09g1263 13 91 C2H2 Transcription Factor Family AT4G21160 45.000 1.28e-19 87.4
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Alju09g1263 09 36234662 36239409 Alju09g1263 09 36234662 36239409 ECH