Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju09g1247 ATGTCTCCACCGCTGCTGGTTTCTGAGGAGGAAGGGCAGAGCAATATTTCAACAGTAGCATCTTCACCGTCCGTGGACTCTATCTCCCACAATGGAACTGCTTTAAAAGAGCGCAATTACCTTGGATTGTCAGATTGTTCATCATCAGTTGACAGTTCTAATGTCCCGAGCATGTCAGATGAGAAAAAGGACAACATGAATTTGAAGGCTACAGAGTTGAGGTTGGGTCTTCCTGGATCCCTGTCTCCTGAAAGGGATTCAGATCTTTATGCATCAAACTCTACAAAGTTTGATGAGAAACCGCTATTTCCTTTGCTTCCTACAAAAGATGGAATCTGTTCATCATCCCAAAAAACTGTGGTTTCAGGAAACAAGAGAGGTTTCTCTGACACAATGGAGGGTTTCCCAGAGGGTAATTTTACTGGTAATTCAGGGATAAATGTAATGTTGCCTAGATCTTCCGGTCCTCAGCCAGCCTTTATGAAGGAAATGCCTGCTAAAGTTCCACAGGAACGGCCTTCTGCTGCGAATGGCCTTAGTCATAATCATACGGGTACTCCTGCTAATGGCAGTGCGCCAGCTGCTAAGGCACAAGTTGTTGGTTGGCCTCCTATAAGATCATATAGGAAGAATTCATTGGCCAATACTTCAAAGAACAATGATGAAGTTGATGGAAAACCCGGTCCTGCTACTCTCTTTGTGAAGGTTAGCATGGATGGCGCTCCTTATCTAAGGAAGGTAGATCTAAGGAATTATACAACATATCAAGAACTGTCTTCTGCCCTCGAGAAGATGTTCAGCTGTTTTACCTTAGGTCAATGCGGTTCTCATGGTGCTCCAGGCAGAGAAATGTTAAGTGAGAGCAAGTTGAGGGATCTTCTTCACGGTTCTGAGTACGTTCTCACTTATGAAGATAAAGATGGTGATTGGATGCTTGTAGGGGATGTACCATGGGGGATGTTCATCGACACATGCAAGAGGCTGAAAATTATGAAGGGTTCTGATGCCATTGGCTTGGCTCCGAGAGCTATGGAAAAATCCAAGAGCAGGAGCTAG 1056 0.4451 MSPPLLVSEEEGQSNISTVASSPSVDSISHNGTALKERNYLGLSDCSSSVDSSNVPSMSDEKKDNMNLKATELRLGLPGSLSPERDSDLYASNSTKFDEKPLFPLLPTKDGICSSSQKTVVSGNKRGFSDTMEGFPEGNFTGNSGINVMLPRSSGPQPAFMKEMPAKVPQERPSAANGLSHNHTGTPANGSAPAAKAQVVGWPPIRSYRKNSLANTSKNNDEVDGKPGPATLFVKVSMDGAPYLRKVDLRNYTTYQELSSALEKMFSCFTLGQCGSHGAPGREMLSESKLRDLLHGSEYVLTYEDKDGDWMLVGDVPWGMFIDTCKRLKIMKGSDAIGLAPRAMEKSKSRS 351
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju09g1247 351 MobiDBLite consensus disorder prediction 1 31 - -
Alju09g1247 351 PANTHER AUXIN-RESPONSIVE PROTEIN IAA17 66 338 IPR003311 GO:0005634|GO:0006355
Alju09g1247 351 MobiDBLite consensus disorder prediction 44 72 - -
Alju09g1247 351 MobiDBLite consensus disorder prediction 171 194 - -
Alju09g1247 351 MobiDBLite consensus disorder prediction 44 61 - -
Alju09g1247 351 Pfam AUX/IAA family 71 342 IPR033389 -
Alju09g1247 351 Gene3D - 228 345 - -
Alju09g1247 351 MobiDBLite consensus disorder prediction 7 31 - -
Alju09g1247 351 MobiDBLite consensus disorder prediction 175 191 - -
Alju09g1247 351 ProSiteProfiles PB1 domain profile. 231 335 IPR000270 GO:0005515
Alju09g1247 351 FunFam Auxin-responsive protein 226 343 - -
Alju09g1247 351 SUPERFAMILY CAD & PB1 domains 229 332 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju09g1247 Alju-ChrAlju09 36013702 36016937 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju09g1247 233 345 B3 DNA Binding Superfamily AT1G30330 27.434 1.49e-07 51.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR AUX/IAA Alju09g1247 AUX_IAA 1.8e-90 CL0072
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Alju09g1247 09 36013702 36016937 Alju09g1247 09 36013702 36016937 ECH