Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju09g1244 ATGGAGCTTACTCAACTCAGTTTTCTGGAGGAACTACTAGCTCCAAGAAGAGACACTTGGAGCACTTTTTCCTCTGGCTTGGGAGAGATATTCCCCTACAATGATTGGAGTTTTGATTCTTTTGTTGAGAACCCACCTTTAGCTCCTTTGAATCCTCCATTACCTTCATTTCCCACTCAACTAGACCCTAGATTTGAGGGTCCATACACTAATGAAGCAGAAGCAGCATATCCATTTGTTGATGGCTTCACATTAACAGAGCTTGACTCTTCATATGCCAGGAATGAAGATTCTGCACTATTTCCTGCACAAGAAAGTAACCCATCAATGGAGGATGAAGAGTTTGGCTTTCTGGGGGGAAGTGAAAATCAGAGCCTTGAGGACATGAACACTACTGTCTGCAAAATTGAGGAACAGGTCACAGAAGTTCCAGTCTTTAACATGGGTTTGTGTGGGGAGAAAAAAAACAAGTCCAAGAAGCTTGAAGGTCAGCCCTCGAAGAATCTAATGGCTGAAAGAAGGAGAAGAAAGCGCCTCAATGACCGCCTCTCCATGCTAAGGTCAATAGTTCCTAAGATCAGCAAGATGGACAGAACATCTATTCTTGGGGACACCATAGATTATATGAAAGAGCTTCTAGAGAGGATCGGTAAGCTGCAAGAAGAAAGAACGGAAGAGAGTGCAAATCAGATAAATTTTCTGGGTAAATCCAAAGAGATGAAGCCAAATGAAGTGATGGTAAGAAATTCACCCAAGTTTGAGGTAGAGAAGGGAGACAAGGACACAAAAGTCAGTATCTGTTGTGGCACAAGGGCTGGATTGTTGCTATCAACTGTGAACACACTTGAAGCATTAGGCCTTGAGATTCAACAATGTGTTATTAGCAGCTTCAATGATTTTTCAATGCAAGCATCTTGCTCAGAGGTATCTGAGCAGAGAACTGGCTTTAGCCCTGAAGAGATAAAGCAAGCACTATTCAGAAATGCCGGTTATGGTGGGAGATGTCTATAG 1011 0.4263 MELTQLSFLEELLAPRRDTWSTFSSGLGEIFPYNDWSFDSFVENPPLAPLNPPLPSFPTQLDPRFEGPYTNEAEAAYPFVDGFTLTELDSSYARNEDSALFPAQESNPSMEDEEFGFLGGSENQSLEDMNTTVCKIEEQVTEVPVFNMGLCGEKKNKSKKLEGQPSKNLMAERRRRKRLNDRLSMLRSIVPKISKMDRTSILGDTIDYMKELLERIGKLQEERTEESANQINFLGKSKEMKPNEVMVRNSPKFEVEKGDKDTKVSICCGTRAGLLLSTVNTLEALGLEIQQCVISSFNDFSMQASCSEVSEQRTGFSPEEIKQALFRNAGYGGRCL 336
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju09g1244 336 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 163 212 IPR011598 GO:0046983
Alju09g1244 336 SMART finulus 169 218 IPR011598 GO:0046983
Alju09g1244 336 Gene3D - 152 213 IPR036638 GO:0046983
Alju09g1244 336 Pfam Helix-loop-helix DNA-binding domain 169 212 IPR011598 GO:0046983
Alju09g1244 336 PANTHER TRANSCRIPTION FACTOR SCREAM2-RELATED 97 330 - -
Alju09g1244 336 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 166 227 IPR036638 GO:0046983
Alju09g1244 336 Coils Coil 209 229 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju09g1244 Alju-ChrAlju09 35960683 35961963 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju09g1244 154 336 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G10570 67.213 2.90e-74 230
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Alju09g1244 HLH 7.1e-10 No_clan