Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju09g1239 ATGGCTCGTCATCAACCCAATAATATTCCCGGCCGTCGTGATCATCATCATAATCATCAGCATCAAGAAACTGTGATTGACATTAAGAGGCCAGTGAACTTCACCGGAGGGCTTGAGTTTTCAGGCCTGACCTACACAGTGACCAAGAAGAAGAAGGTTGATGAGAGCTGGGTGAAGGAGAACGTTGACTTGCTTCATAATATTACCGGCTATGCACCAAAGGGTTGTATCACCGCCGTGATGGGTCCCAGTGGCGCCGGCAAGTCCACCTTCTTGGATGGTCTCGCCGGCAGAATTGCCAGTGGCAGCCTCAAGGGAAGGGTGTGCTTGGATGGCACTGATACTAACCCTACTTTGATCAAAAGAACTTCTGCTTATATCATGCAGGACGATAGGCTCTTCCCTATGCTCACTGTCTACGAAACTTTCATGTTCGCCGCCGATTTTCGACTCGGCCCTCTTCCCCTTATTGAAAAGAAAGAAAGAGTAGAGAAGCTCATTGAGCAGCTTGGCTTATCCTCAACTCGAAACACGTACATAGGAGATGAAGGCACAAGGGGAGTATCTGGAGGAGAGAGGCGGCGAGTGTCGATCGGAGTCGACATCATCCACGGACCGTCGCTTCTATTTCTGGATGAGCCGACTTCCGGTCTGGACTCAACCAGCGCACACAGCGTGATAGAGAAGGTTCACGACATCGCACGCGGCGGAAGCACCGTGATCCTCACCATCCACCAGCCTTCATCAAGAATTCAGCTCCTTCTGGACCACATGATCATTCTCGCCAGAGGACAACTCATGTTTCAGGGTTCTCCCAAAGACGTGTCTCTCCATCTGGGACGCATGGGACGTAAAGTTCCCAAGGGAGAGAATCCGATAGAGCACCTCATTGATGTGATTCAAGAATATGATCTGTGTGATGTTGGTGTCGGAGCTCTAGCTGAGTTTGCCCGCACTGGAGTGAAACCCCCTCCCTTGCCTGACCAGGAATTCTCCCTCTCCACCGTCGTACCGTCAACCCCAGGCAGAAACCATCGCCTCGGGGATCGTTCCGCCGTAGATGATTTCGATCACAGTCTGAGAAGTATGAGAAGCCCTCGTACACCCCATAGTGGATTGTTTCAGATGTTAACACCTTCCCGCTTTAAGAATGAACATAAACTGCAGAATAATCCTATAAGTAATGCTTCGCCTGGGTACTACACGTACTCGAGCGAGATCCTGCCGGCGACACCAACGCCTCACAGCAGCGACTACACTGTGAATGAGAATGACTACCTGACGCCGCCGGACGGCGTTATGCCAAAGCATGTGGGTTCGAAATTCACAAACTCGTTCTTGAGGGAGACATGGATTCTGATGTGGCGGAACTTCATAAACATCCGGCGAACCCCTGAGCTTTTCCTCTCAAGACTAATGGTGCTCACGGTGATGGGCTTCATGATGGCCACCATGTTCAAGAACCCAGGACAAGACGTTCAAGGAATCACCAACCGCCTCAGCTTCTTCATCTTCACCGTCTGCCTCTTCTTCTTCTCCTCCAACGACGCCGTTCCGGCCTTCATTCAAGAACGATTCATCTTCATCAGAGAAACCTCCCACAACGCCTACCGAGCCTCGTCCTACACCATCGCCGGAATAATCACTCACACCCCTTTTCTTCTGCTGCAAGCTACCGTCTACGCCATAATTGTCTGGTTTGCTTTGAAGCTTCAAGGTCCATTTATGTACTTCGTTCTTGTTCTCTTTGTCTCTCTTCTCTCCACCAACTCGTTCGTGGTTTTCGTGAGCTCGGTGGTTCCGAACTATATTCTCGGTTACGCCGCCGTGATCGCCTTCACCGCTTTGTTCTTCTTGTTCTGTGGTTACTTCTTGAGCAGCCATGATATTCCGATTTATTGGCGATGGATGAACAAAGTTTCGACCATGACGTATCCTTATGAGGGGCTTTTGATCAACCAGTATCGAAACTCACATGTGTTTGGGAAAAATCTGGACGGGACAAATATTATAGGTCTTGATATCTTGAACGGTCTTCATATCAGTACTAATTCGTTTAGGAAGTGGGAAAATGTGATTATAATGTTGTTATGGGCTGTCCTATATAGGATTTTGTTTTACTTGGTCCTTCGTTTCGCCTCCAAAAACCAGAGGTCGTAG 2160 0.4921 MARHQPNNIPGRRDHHHNHQHQETVIDIKRPVNFTGGLEFSGLTYTVTKKKKVDESWVKENVDLLHNITGYAPKGCITAVMGPSGAGKSTFLDGLAGRIASGSLKGRVCLDGTDTNPTLIKRTSAYIMQDDRLFPMLTVYETFMFAADFRLGPLPLIEKKERVEKLIEQLGLSSTRNTYIGDEGTRGVSGGERRRVSIGVDIIHGPSLLFLDEPTSGLDSTSAHSVIEKVHDIARGGSTVILTIHQPSSRIQLLLDHMIILARGQLMFQGSPKDVSLHLGRMGRKVPKGENPIEHLIDVIQEYDLCDVGVGALAEFARTGVKPPPLPDQEFSLSTVVPSTPGRNHRLGDRSAVDDFDHSLRSMRSPRTPHSGLFQMLTPSRFKNEHKLQNNPISNASPGYYTYSSEILPATPTPHSSDYTVNENDYLTPPDGVMPKHVGSKFTNSFLRETWILMWRNFINIRRTPELFLSRLMVLTVMGFMMATMFKNPGQDVQGITNRLSFFIFTVCLFFFSSNDAVPAFIQERFIFIRETSHNAYRASSYTIAGIITHTPFLLLQATVYAIIVWFALKLQGPFMYFVLVLFVSLLSTNSFVVFVSSVVPNYILGYAAVIAFTALFFLFCGYFLSSHDIPIYWRWMNKVSTMTYPYEGLLINQYRNSHVFGKNLDGTNIIGLDILNGLHISTNSFRKWENVIIMLLWAVLYRILFYLVLRFASKNQRS 719
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju09g1239 719 CDD ABCG_EPDR 38 270 - -
Alju09g1239 719 FunFam ABC transporter G family member 6 48 286 - -
Alju09g1239 719 MobiDBLite consensus disorder prediction 8 25 - -
Alju09g1239 719 ProSitePatterns ABC transporters family signature. 188 202 IPR017871 GO:0005524|GO:0016887
Alju09g1239 719 SMART AAA_5 74 272 IPR003593 GO:0016887
Alju09g1239 719 Pfam ABC transporter 65 216 IPR003439 GO:0005524
Alju09g1239 719 Pfam ABC-2 type transporter 449 655 IPR013525 GO:0016020|GO:0140359
Alju09g1239 719 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 60 276 IPR027417 -
Alju09g1239 719 Gene3D - 38 282 IPR027417 -
Alju09g1239 719 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 38 288 IPR003439 GO:0005524
Alju09g1239 719 PANTHER ABC TRANSPORTER G FAMILY MEMBER 28 21 707 - -
Alju09g1239 719 MobiDBLite consensus disorder prediction 1 25 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju09g1239 Alju-ChrAlju09 35892903 35895686 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju09g1239 25 302 Calmodulin-binding Proteins AT2G36910 27.778 1.79e-11 65.9