Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju09g1238 ATGGAGGAATTGGATAACTACCAGAGTTTAAGACTTGTTATGGTTTATATCCTTTGTCTTCTTTTGTTTATCAGATCAGCTTTTGCAAATGAAGATTTTCTGAGCATAGCGTGTTGTGCTGATTCAAATTATACAGATCCAAAGACTTCAGTAAATTACACATCAGACTTCAGTTTCTACCCAGATAAAACAAGTTGCTTAGACACAACTAAGCCTGTGGAGAACCATGAAGGCCATACAAAAGCAAGAGTGTTTGATATAGATAAAGGAAAAAGATGTTATAACTTGCCAACAATTAAGAATCAAGTGTATCTGCTAAGGGGCACATTTCCATCAGATGGATCTCTAAGCGAATCTCCAAATTCCTCTTTCGATGTTACAATAGGGTTTACCTTATTAGGTGTGGTAGAGAAACCATCTCAGGATGTGGAATCACTTGAAGGAATTTTCAGAGCTACAAAGAATTACACAGATTTCTGCTTGGTGAAGAACAAAGGAAGTCCTTGTGTTTCTCTGATTGAACTGAGGCCGTTGGATGAAGAGTACCTACTGGATTCACCTCCTAGTGTCCTAAAAGTGATCACAAGAAATAACCTAGGGGCCACTGGAGATGATATCAGGTACCCAATTGACCAAAGTGACAGAATCTGGAAAGCTACTTCAAGTTCGTCATTTTCTCCCAAATCATTATCTAATGCAAACATTTCCAGCCACAATGCTGCTAATTCAACACCTCCTCTACAAGTCTTGCGAACCGCTCTTACGCATTCTGAGCGATTGGAATTCATCCACAATGGCCTTGACCCTGGGAATTCCGAATACCGTGTGATTCTCCACTTTCTTGAATTGAATAACAGTGTCGGACTAGGCAAAAGGGTGTTTGATATCTACGTCAACGGTGTCATCAAAGAGCCCAAGTTTGACGTATTTGGTGGTGGATCGAACTATAGACAAGCTGCTTTGAACTTTTCAGCAAATAGTTCGCTGAATCTAACCTTGAGCAAGACTTCTGGGTCTGAGAATGGACCTCTTTGTAACGCGTACGAGATCCTAAAGGTTATCACTTGGATACAGGAGACCAACCAAACAGAATCGGAAGTGATGTTGAAGGTGAGAGAGCAACTGTTAGAGAATAACAGAGGAAATAAAGAGCTGGAGAGTTGGACTGGAAACCCTTGCATTCAGTTTCCATGGCAGCATGTAGGATGTGATCGTTTAAGTGGTCAACTAGTTATCACTAAACTGGATCTTTCTTCAAGTAATCTCCGAGGACCAATTCCTTCCAGTATTACTGAGTTGCCCAACTTGAAAATACTGAACTTGAGCTACAATAGCTTTACTGGGAATATTCCCTCATTTCTGCCTTCATCTTTGCTTATATCAATAGATCTGAGCCACAATGATCTCACAGGAACGCTTCCATGGACCCTTCCCTTACTGCCACATCTGAAGTCCTTGTATTTTGGCTGCAATAAGCGTATGAACAAGGAGATTCCAACTTCCTTGAACAGCTTAGAAAATACAGACTATGGAAGTTGCAAATCTGGAGACCCAGGAATTTCACAAAAGCAAATCATCATTGGCACTGTTACATGTGGATTGTTCCTGATCATTTTGGCTGTTGGAATTCTTTTCCGTTGCCATAGAAGAGGAAAATTAGTCCCCTGGAAAACATCTGATGAAAAGGGATACCCAACAACCACAAATTTAATTTTCTCTTTAACCAGTAAAGATGACTTCTTCGTAAAGTCAGTATCCATTCAAACATTCACCCTGGAATACATAGAGGCAGCCACCCAAAACTACAAAACTTTGATTGGTGAAGGAGGGTTTGGGTCTGTTTACCGTGGCACTCTAGATGATGGCCAAGAAGTGGCAGTGAAGGTCCGTTCAGCCACATCAACTCAAGGAACTCGTGAATTTGACAACGAGGTAAACTTGCTCTCAACTATACGGCATGAGAACCTGGTGCCTCTTATTGGTTACTGTTGTGAAAAGGATCAACAAATTCTGGTGTATCCTTTTATGTCCAATGGTTCTTTACAGGATAGGCTTTATGGGGGACCAGCAAAGAGAAAACCATTAGACTGGCCAACCAGGTTATCTATTGTTCTGGGTGCAGCTCGAGGTTTGTCATATCTACATACATTTTCGGGACGTTCTGTTATACATAGAGATGTCAAATCAAGCAACATACTTCTGGATCACAGCATGTGTGCCAAGGTAGCAGACTTTGGTTTCTCAAAATATGCTCCCCAGGAAGGAGAAAGTGGTGCTTCTCTTGAAGTAAGAGGAACCGCAGGATATATGGACCCTGAGTATTATACAACCCAGCAATCATCTACAAAGACTGATGTGTTTAGCTTTGGCATGGTCCTACTTGAAATTTTGAGTGGCCGGGAACCTCACGACAAAAAAAGACCGAGGAATGAGTGGAACTTGGTGGAATGGGCTGAACCATACATAAGGGCGTCGAAGATCGATGAAATAGTGGATCCTAGTATCAAGGGAGGATATCTCGCAGAGACCATGTGGAGAGTAGTGGAAACAGCAGTGTCATGTATTGAACAACTCTCAGTGGATCGACCAAGCATGGCTGATATTGTACGTGAGTTGGAGGAAGCTCTGATTACAGAAAACAATGCATCAGAATACATGAAATCCATAGAAAGCCTTGGAGGATCAAATCGATACTCTATTGTGATAGAGAAGATGGTAGCCCCATCTCCATCTACAACAGAATCAACTCTCTCTCCCAAAACCTCCCACCCACAGCCCAGATAG 2784 0.4181 MEELDNYQSLRLVMVYILCLLLFIRSAFANEDFLSIACCADSNYTDPKTSVNYTSDFSFYPDKTSCLDTTKPVENHEGHTKARVFDIDKGKRCYNLPTIKNQVYLLRGTFPSDGSLSESPNSSFDVTIGFTLLGVVEKPSQDVESLEGIFRATKNYTDFCLVKNKGSPCVSLIELRPLDEEYLLDSPPSVLKVITRNNLGATGDDIRYPIDQSDRIWKATSSSSFSPKSLSNANISSHNAANSTPPLQVLRTALTHSERLEFIHNGLDPGNSEYRVILHFLELNNSVGLGKRVFDIYVNGVIKEPKFDVFGGGSNYRQAALNFSANSSLNLTLSKTSGSENGPLCNAYEILKVITWIQETNQTESEVMLKVREQLLENNRGNKELESWTGNPCIQFPWQHVGCDRLSGQLVITKLDLSSSNLRGPIPSSITELPNLKILNLSYNSFTGNIPSFLPSSLLISIDLSHNDLTGTLPWTLPLLPHLKSLYFGCNKRMNKEIPTSLNSLENTDYGSCKSGDPGISQKQIIIGTVTCGLFLIILAVGILFRCHRRGKLVPWKTSDEKGYPTTTNLIFSLTSKDDFFVKSVSIQTFTLEYIEAATQNYKTLIGEGGFGSVYRGTLDDGQEVAVKVRSATSTQGTREFDNEVNLLSTIRHENLVPLIGYCCEKDQQILVYPFMSNGSLQDRLYGGPAKRKPLDWPTRLSIVLGAARGLSYLHTFSGRSVIHRDVKSSNILLDHSMCAKVADFGFSKYAPQEGESGASLEVRGTAGYMDPEYYTTQQSSTKTDVFSFGMVLLEILSGREPHDKKRPRNEWNLVEWAEPYIRASKIDEIVDPSIKGGYLAETMWRVVETAVSCIEQLSVDRPSMADIVRELEEALITENNASEYMKSIESLGGSNRYSIVIEKMVAPSPSTTESTLSPKTSHPQPR 927
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju09g1238 927 Gene3D Ribonuclease Inhibitor 360 515 IPR032675 -
Alju09g1238 927 SMART serkin_6 602 877 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju09g1238 927 MobiDBLite consensus disorder prediction 908 927 - -
Alju09g1238 927 Pfam Malectin-like domain 40 353 IPR024788 -
Alju09g1238 927 Pfam Protein tyrosine and serine/threonine kinase 603 872 IPR001245 GO:0004672|GO:0006468
Alju09g1238 927 ProSiteProfiles Protein kinase domain profile. 600 876 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju09g1238 927 SUPERFAMILY L domain-like 385 506 - -
Alju09g1238 927 ProSitePatterns Protein kinases ATP-binding region signature. 606 628 IPR017441 GO:0005524
Alju09g1238 927 Gene3D Phosphorylase Kinase; domain 1 572 675 - -
Alju09g1238 927 Gene3D Transferase(Phosphotransferase) domain 1 676 893 - -
Alju09g1238 927 CDD STKc_IRAK 606 874 - -
Alju09g1238 927 PANTHER OS07G0107800 PROTEIN-RELATED 34 879 - -
Alju09g1238 927 FunFam Nodulation receptor kinase 565 675 - -
Alju09g1238 927 ProSitePatterns Serine/Threonine protein kinases active-site signature. 722 734 IPR008271 GO:0004672|GO:0006468
Alju09g1238 927 FunFam LRR receptor-like serine/threonine-protein kinase IOS1 676 885 - -
Alju09g1238 927 Gene3D - 192 354 - -
Alju09g1238 927 SUPERFAMILY Protein kinase-like (PK-like) 580 873 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju09g1238 Alju-ChrAlju09 35882495 35888603 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju09g1238 10 879 Receptor kinase-like Gene Family AT1G67720 34.513 2.71e-134 424
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-I-1 Alju09g1238 Malectin_like 5.7e-50 CL0202