Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju09g1216 ATGGCGGCGGTGCAACCGGAGGTTGAGCATCCCCGGAAGGCTTTTGGATGGGCTGCCAGAGATCCCTCCGGTCTTCTTTCCCCTTTCAACTTCTCTAGAAGGGAAACAGGGGAGAAAGATGTGGCATTCAAAGTATTGTACTGTGGGGTATGCCATTCGGACCTCCACATGTTGAAGAATGAGTGGCGCGTCTCCACCTATCCTCTTGTTCCTGGGCACGAGATTGTTGGGATAGTAACAGAAGTGGGAAGCAAGGTAGAGAAATTCAAGGTTGGAGACAAGGTTGGCGTAGGATGCATGGTTGGGTCCTGCAAATCCTGTCAAAGCTGCTCGGACAATCTTGAGAACTATTGCCGAAAAATGATCCTCACGTACGGTTCTAAGTATGTGGATGGATCTTCCACCTATGGAGGCTATTCTGACCTGATGGTTGCAGAGGAACGCTTTGTGATTCGTATCCCAGATGGTTTACCTCTTGACGTTGCAGCTCCTCTCCTTTGTGCTGGGATCACAGTGTATAGCCCTCTGAGATTTTTTGGTCTTGACAAACCAGGCCTTCATGTGGGTGTGGTTGGTCTTGGTGGACTTGGTCATTTAGGTGTCAAATTTGCTAAAGCTTTTGGTGCTAAGGTTACAGTAATCAGTACATCTCCTAACAAAAAGGAGGAAGCCATTGAACGTCTTGGAGCTGACTCCTTTGTGGTTAGCACTGAGCCAGTTCAGATTAAGGCTGTATTAGGCACTTTTGATGGAATCATTGATACAGTTTCTGCAGCCCATCCTCTCTTGCCTTTGCTTGGTTTGTTGAAGTCTCATGGGAAACTTGTGCTGCTTGGTATACCAGAGAAGCCCCTGGAGTTGCCAGTCTTCCCTTTAATGATGGGGAGAAAGACGATAGCTGGAAGTTCCATTGGAGGGATTAAGGAGACACAAGAAATGATGAATTTTGCTTCTGAACATAATGTGACACCCGACATTGAGGTTATTCCTATGGATTACGTGAACACTGCAATGGAGCGCCTTCACAAAGCAGATGTCAAGTATCGTTTTGTTATCGACATTGGCAACACCTTGAAGCCAAGCCTTTAATTCGAGGATTTCAACCTGCGCTATGACCTCAGCGAGAAGGGCGTCTCAGGCATCGCCGGTAGGAGGAGCCGAGATCTCCCGCTCGTCTTCAAAATCTTCCTCCAGCTTCCGCTTCTGGCCTTTCCTCTCAAGGAGGCTCTGATCTTAGCGCTTATGAGGCTTCATAGAAAGGAAAGGCCAGGGGTCTCCCGCAGAGAGCGCGGGGCTGGAAATGGATTTAGAGAGAGTTGA 1320 0.4833 MAAVQPEVEHPRKAFGWAARDPSGLLSPFNFSRRETGEKDVAFKVLYCGVCHSDLHMLKNEWRVSTYPLVPGHEIVGIVTEVGSKVEKFKVGDKVGVGCMVGSCKSCQSCSDNLENYCRKMILTYGSKYVDGSSTYGGYSDLMVAEERFVIRIPDGLPLDVAAPLLCAGITVYSPLRFFGLDKPGLHVGVVGLGGLGHLGVKFAKAFGAKVTVISTSPNKKEEAIERLGADSFVVSTEPVQIKAVLGTFDGIIDTVSAAHPLLPLLGLLKSHGKLVLLGIPEKPLELPVFPLMMGRKTIAGSSIGGIKETQEMMNFASEHNVTPDIEVIPMDYVNTAMERLHKADVKYRFVIDIGNTLKPSLXFEDFNLRYDLSEKGVSGIAGRRSRDLPLVFKIFLQLPLLAFPLKEALILALMRLHRKERPGVSRRERGAGNGFRES 439
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju09g1216 439 ProSitePatterns Zinc-containing alcohol dehydrogenases signature. 72 86 IPR002328 GO:0008270|GO:0016491
Alju09g1216 439 SUPERFAMILY GroES-like 20 185 IPR011032 -
Alju09g1216 439 FunFam Cinnamyl alcohol dehydrogenase 168 324 - -
Alju09g1216 439 Gene3D - 17 354 - -
Alju09g1216 439 PANTHER ALDEHYDE REDUCTASE 6 357 IPR047109 GO:0016616
Alju09g1216 439 SMART PKS_ER_names_mod 24 352 IPR020843 GO:0016491
Alju09g1216 439 FunFam Putative cinnamyl alcohol dehydrogenase 6 325 354 - -
Alju09g1216 439 CDD CAD1 15 353 IPR047109 GO:0016616
Alju09g1216 439 Pfam Zinc-binding dehydrogenase 195 317 IPR013149 -
Alju09g1216 439 Gene3D - 168 324 - -
Alju09g1216 439 FunFam Uncharacterized protein 17 167 - -
Alju09g1216 439 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 157 322 IPR036291 -
Alju09g1216 439 Pfam Alcohol dehydrogenase GroES-like domain 39 152 IPR013154 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju09g1216 Alju-ChrAlju09 35611968 35616796 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju09g1216 12 361 Monolignol Biosynthesis Gene Families AT4G37990 73.143 4.33e-176 495