LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Alju09g1204	ATGACTGAAGCTGGTGTAAAACCTCGTCAAGTGCTTAAAACTCTTAAACAAAGCAATCCAGAACTGCAGTCAACTCCAAGGCATTTGTACAACCTCAAAGCAAAGATCCGTCAGGGAAATCTATCAGAGAACACTTTCAAGTCATGGAGGCCAAACAGATCTTTACCCATTGAAACAAACAACACTCCATCTGGTGGTTCATCAATGCAAAACTACCAGCCGCTGAAGGTTCCTAATTTTATTGGGGGGAGATACATAGATTCACAAAGTTGTGGAATTCTTGATGTTACAAATCCTGCAACACAAGAAGTTGTGTCTCAAGTTCCTTTAACTACTTATGAAGAGTTCAAAACTGCAGTTAAAGCAGCCAAGCAAGCTTTTCCTTCATGGAAAAGCACTCCAATCACCACTCGCCAGCGTATTATGTTTAAGTTCCGAGAGCTTATCTGCAGGGACATTGATAAGCTTGCCATGAATATCACCATAGAGCAGGGTAAGACTTTAAAAGGTGCTAAAAGAGACGTGCTCCATGGTTTAGAGGTGGTGGAACATGCTTGTGGGATGGCAAATCTGCAAATGGGGGAGTTTGCCCCTAATGCTCGTGATGGAATTGATACATACTGCATAAGAGAACCCCTTGGAGTTTGTGCTGGAATATGCCCAGTCAACTTTCCAGCAATGATACCTTTGTGGATGTTCCCTATAGCAGTTGTATGTGGCAACACATTTATTCTCAAGCCATGTGAGAAGAATCCAGGGGCTTCAATGATACTTGCAGCACTAGCAATGGAAGCGGGTTTTCCAGATGGTGTATTAAACATTGTTCATGGTACCCATGAGATTGTTAATCACATATGTGATGATGAGGATATAAAAGCTATATCATTTGCGGGTCCAACTGCGGCTGGAATGCACATATATGCTGGGGCTGCTGCTAGAGGGAAACGTGTCCAGTCCAATACAGGCAACAAAAATCATGCAGTTGTCATGCCAGATGCTAGCATGGATGCTTCTCTAGATGCTCTTATTACTGCTTCCTTTGGTGAGGCTGCAGAGAGATGCATGACTCTAAGCACAGCTATTTTTGTTGGAGGATCATTACCATGGGAAGAAGAACTTGTGCAGCGTGCCAAAGTACTTAAAGTGAATGCAGGAACAGAGCCTTGTGCTGATCTTGGTCCAGTTATTAGCAAGGAGGCAAAGGATCAGATATGTAGATTAGTTCAGAGCAGTGTTGAAAATGGTGCAAGGCTACTGCTTGATGGAAGACATATTGCGGTACCGGGATATGAGAATGGGAACTTTGTTGCCCCTACAATTTTATGCGATGTTGCAATCGACATGGAGTGCTACAAGGAAGAAATTTTTGGACCAGTTCTTCTCTGCATGCAGGCTAATAACCTAGATGAGGCAATATCAATAATCAACAAAAACAAGTATGTAAACGGAGCTACCATATTTACCACATCTGGTATAGTTGCTAGGAAGTTCCAGAACGAGGTTGTGGCTGGTCTGGTTGGAATCAATGTTACTGCTCCTATTCCTTTGCCATTTTCTTCCTTCAGCGGGTCAAAGGCATCTTTTGCTGGGGATCTAAACTTTTGTGGTAAGGAAGGAGTTCAGTTTTATACCCAAATCAAAACAGTGGCACAACAATGGAAGGAGTTCCCAAGTCTTGGTGTTTTACCTTCTGCAAGTCCAGCTGACATGGGTAGGACTGATCGACATGTCTCATCATCAGTGCCTCCACCAGACAGACACTCACCTAGAGAAATTATGTCACAAATCTTGCCTCTGTCTGAGAGTAATTCACCAGCACAAGGGGTGCAAATTGCGATTCCAGACCTTACTAATGAGATCACAACCGTGTCATCTGCTTCTCCATCAACTGATAAGGGTCTTGGAAGACCAGCCATGTCCCTGGTTCTGCCTTCATCGTCTGTGAGAGACATGGAAGATCAGGACATGTCACTGGTATTATCACCTGCATCTCGGAGAGACATGATGAGCCAGCAAGTGTCAGTAGCCACACCCCAGACATCAGAGAGGCTGTACTTCCCTAAATCACCACAATGGAATGAAGGTTCCTCTGCAACATCTCAAAGGAGGGAAAATATCTCATCCACTTCTGATAGGAGTCACGTGCCTTCATCTCTAAGAAATAATAATACAGCGCCAGCATCTCAGAGAACTGACGCCGACGCCACCACAGCTTTGGAATCAGAGAGGCCATACATGCCCTTATCCCATAAAATTGATAGCATCGGTCCATCCCACCGGATAGATGCTTCTATGCCTTCTACTTCTGGAAGTGTTGTGTATGTCCTAGCACCATCTCATTTAAACGAGAGCCTTGGCCGAACATTTGAAAGACCTGAACCCATGTTTACAACTTCTGAGAGGATATATATGCCTGCATTATCTCACAGTACTGATATTGGCTTAGGTCCTACTTCAGAGAGGATGTACATCCCTGCAACATCTCATAGAACTGAAAGAATTAGCGCTCCATCCCAGCTTGGCGATGCTTTGCCTCCTATGGTACAAAATATGACGGCAAGTTCAGAGAGGTTATATATACCAGCTTCATCTCAAAGTATGTACAATCGTGGTGACTCGGTACTTTCAATAGATGAATTTTCCAGCCAATCTTCAGCTCTGACTTTACCAAGATCTCAGAGGATATGA	2688	0.4382	MTEAGVKPRQVLKTLKQSNPELQSTPRHLYNLKAKIRQGNLSENTFKSWRPNRSLPIETNNTPSGGSSMQNYQPLKVPNFIGGRYIDSQSCGILDVTNPATQEVVSQVPLTTYEEFKTAVKAAKQAFPSWKSTPITTRQRIMFKFRELICRDIDKLAMNITIEQGKTLKGAKRDVLHGLEVVEHACGMANLQMGEFAPNARDGIDTYCIREPLGVCAGICPVNFPAMIPLWMFPIAVVCGNTFILKPCEKNPGASMILAALAMEAGFPDGVLNIVHGTHEIVNHICDDEDIKAISFAGPTAAGMHIYAGAAARGKRVQSNTGNKNHAVVMPDASMDASLDALITASFGEAAERCMTLSTAIFVGGSLPWEEELVQRAKVLKVNAGTEPCADLGPVISKEAKDQICRLVQSSVENGARLLLDGRHIAVPGYENGNFVAPTILCDVAIDMECYKEEIFGPVLLCMQANNLDEAISIINKNKYVNGATIFTTSGIVARKFQNEVVAGLVGINVTAPIPLPFSSFSGSKASFAGDLNFCGKEGVQFYTQIKTVAQQWKEFPSLGVLPSASPADMGRTDRHVSSSVPPPDRHSPREIMSQILPLSESNSPAQGVQIAIPDLTNEITTVSSASPSTDKGLGRPAMSLVLPSSSVRDMEDQDMSLVLSPASRRDMMSQQVSVATPQTSERLYFPKSPQWNEGSSATSQRRENISSTSDRSHVPSSLRNNNTAPASQRTDADATTALESERPYMPLSHKIDSIGPSHRIDASMPSTSGSVVYVLAPSHLNESLGRTFERPEPMFTTSERIYMPALSHSTDIGLGPTSERMYIPATSHRTERISAPSQLGDALPPMVQNMTASSERLYIPASSQSMYNRGDSVLSIDEFSSQSSALTLPRSQRI	895

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Alju09g1204	895	Gene3D	Aldehyde Dehydrogenase; Chain A, domain 1	96	530	IPR016162	GO:0016491
	Alju09g1204	895	MobiDBLite	consensus disorder prediction	664	734	-	-
	Alju09g1204	895	FunFam	Methylmalonate-semialdehyde dehydrogenase [acylating]	81	328	-	-
	Alju09g1204	895	MobiDBLite	consensus disorder prediction	565	590	-	-
	Alju09g1204	895	MobiDBLite	consensus disorder prediction	47	71	-	-
	Alju09g1204	895	NCBIfam	CoA-acylating methylmalonate-semialdehyde dehydrogenase	78	553	IPR010061	GO:0004491
	Alju09g1204	895	CDD	ALDH_F6_MMSDH	77	553	IPR010061	GO:0004491
	Alju09g1204	895	FunFam	Methylmalonate-semialdehyde dehydrogenase (Acylating)	322	522	-	-
	Alju09g1204	895	Gene3D	Aldehyde Dehydrogenase; Chain A, domain 2	322	522	IPR016163	GO:0016620
	Alju09g1204	895	Pfam	Aldehyde dehydrogenase family	86	549	IPR015590	GO:0016491
	Alju09g1204	895	SUPERFAMILY	ALDH-like	70	555	IPR016161	GO:0016491
	Alju09g1204	895	PANTHER	MALONATE-SEMIALDEHYDE DEHYDROGENASE	1	670	IPR010061	GO:0004491
	Alju09g1204	895	MobiDBLite	consensus disorder prediction	661	734	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Alju09g1204	Alju-ChrAlju09	35380223	35388183	Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Alju09g1204	68	537	Aldehyde Dehydrogenase Gene Family	AT2G14170	71.277	0.0	709