Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju09g1180 ATGGAAGCTACCACCACCCAAACAGAGAAGATATATGTTGCTGTGAGTAATGATCTTCAAGATGGAATCAAAACCTTGAATTGGGCTCTCCATAAATGGAAATCTCATCCTATTTCCATTGTTATTCTCTATGTCAATCACAATGCTTCCAAGGATCATGTTCATACCCCATTTGGCAAACTCCCAGCAAGATCTGTGAACGATGAGATGTTACCAGCTCTCAGGAAACAAGAACAAGATAAAATCCACAAACTTCTTTCCAAGTACATATCTTTCTGTGACAAGGTGCCAGCTAAAATACTAGAAGTCGAGAAGTTTGATGAACCAATCCAAAAAAGAATCGTGGACATGATTATTGGTCTAGAAATAACCAAACTTGTCATTGGATTTTCAGTGATGAAACCCTCCTGGAAATCACGAGGTGCCACAAGTGGATTGTTCTATATTCATCAGCATAAGCCTGAATTCTGTGAACTGTTCATCTTATGTGGAGGGAAACAAGTGTTCACGAGAGAACAGAACGATGAGAAGATCATGGAGGAAGACAATGGTGTTGTGGTAGCCAGAATAAGAGACAAGAAAACATTTAAGGATTGGTTAGAGAAAGTGTTTCCTGAGAGAAACAACATAGATTCCCCAGATTCTAGAATCTCTCCTGGATCAGCAGCATCAACTTCTTCATCATCGGCAAGTATGGAATCTCCAGGTTCACTACAGAACCAGTGGGAAGCCCATCTGCAAGAGATTGAAACTTATTTCCAGGATTTGTGTTCTTCTAACATGAATATTGATGAACAAATTAGACTTGAGGAACAAGACAGTGACGTCTCGCGGATTAGTGGAATTCAGCTAGATGATGTCAGGCAACAGAACAATTCTAAACAGAAAAGAATTGAGACTCTGAAAGGAAAATTGGAGGAGGCACGTAAGATGATCCAACTGAAGAGGAAAGAAGCTAAGGATCAAAGTGATAGGCATGCACAAGCTGAATGGGCTATTTGTTTATGCAACACTCGGGCTCAAGAACTTGAAGGCAAAATTAACGAAGAGATGAACATGAAGGAGGAGTTAGCAAAAGAATTGGAAGTAGAAAAAGAAACCATATATGAAACCAGACGTGATATTGAAGAAAGCAGAAAAAGGTTAAGCTCATTGTTGGAGCTTCAATTGGAGCTCTCAAACAAGCTTCAGATCTCTACACAAGCAAGGTCACAAGCCGAAATCCAACTGGAGAATGCTGCGAATACCAGGTCGGAGATGGTGGCCGACATAGACCAGCTTAGGAGACAAAGAGACGTGCTTTACAGAAGGATCGAGTTCTGTAAAGATAAGGACGCCATAGGAATGGCGGCCAAGCTGACTGAACCCAGTTTAAGTTTCAGAGAGTACACGACGGACGAGATCAGGTTGGCTACCGACGACTTCTCCGACCGCCTCATGTTGAAGTCCGGTGGTGCTGACTGGACCAATGTTTACAGAGGAAAGATCAATCATTCAACTGTAGCCATCAAGATGCTCACTTCCACTCATGACTGGTCCCCCCAAGAATTCCAAGCCAAGGTGAGACTTCTTGGCAGTATTCGACATCCTCATGTGGTTGCTTTGGTGGGCTTTTGCACTGAGCTAAAATGCATAGTTCTGGAATATATGAATAATGGTAGCTTAAGGGACATGCTATTTTCACGAAGAAGAAACCGGGCCTTACGATGGCAAGACCGAATCAGGATAGCTACTGAAGTTTGTTCGGGTCTGGGCTTTCTTCATTTGGCCCAGCCCAGGCCCTTCATACACGGGCACCTAACTCCCTCTAGCATCCTTCTTGATCGCAATCTTGTTGCGAAAATCAAAGTCTTTGGGTCCAATGAAGGCAGCCCAGAATCTGACGTAAGGGCCTTTGGGGTTTTGATCATGCATCTCCTAACAGGAAGAAACTGGGTGGGCCTAGTTAAGGAGGAGATGATGATTGGAGGGTCTTTGGTGAGGGTTCTGGACGAGAGGGCCGGGGTGTGGCCGTTGAATGTGGCCCAGAAGCTAGCGGACCTAGCCGTGAAGTGCATGGGCTTTCCCAATGGGCCCAAGCCCAAAGAAGGATTAAGCATTGGGAATGTAACGTTGGAACTAAATGAAATCAGAAGAGAGGCCAACGAGGAAGTTGCAAGAGGAGACTCGTCAAGATTTTGTGGAGGTGTAGATAAAGAAGAGCTGATGGATGTGCCCAATGTATTTCTATGTCCCATACTTCAGGAGGTGATGAAGAACCCACACGTGGCAGGGGATGGGTTTTCATATGAATTAGAAGCAATAGAAGAATGGGTTGGGTCAGGGCATGATAGATCGCCCACGACCAATGCAAAGCTGCCTCACTTGTTCTTTACCCCTAATCACTCCCTTCGTTCCCTAATTCGGGACTGGCAAACTAAAACATCTTCTCAATTTCCAAATTAG 2445 0.4417 MEATTTQTEKIYVAVSNDLQDGIKTLNWALHKWKSHPISIVILYVNHNASKDHVHTPFGKLPARSVNDEMLPALRKQEQDKIHKLLSKYISFCDKVPAKILEVEKFDEPIQKRIVDMIIGLEITKLVIGFSVMKPSWKSRGATSGLFYIHQHKPEFCELFILCGGKQVFTREQNDEKIMEEDNGVVVARIRDKKTFKDWLEKVFPERNNIDSPDSRISPGSAASTSSSSASMESPGSLQNQWEAHLQEIETYFQDLCSSNMNIDEQIRLEEQDSDVSRISGIQLDDVRQQNNSKQKRIETLKGKLEEARKMIQLKRKEAKDQSDRHAQAEWAICLCNTRAQELEGKINEEMNMKEELAKELEVEKETIYETRRDIEESRKRLSSLLELQLELSNKLQISTQARSQAEIQLENAANTRSEMVADIDQLRRQRDVLYRRIEFCKDKDAIGMAAKLTEPSLSFREYTTDEIRLATDDFSDRLMLKSGGADWTNVYRGKINHSTVAIKMLTSTHDWSPQEFQAKVRLLGSIRHPHVVALVGFCTELKCIVLEYMNNGSLRDMLFSRRRNRALRWQDRIRIATEVCSGLGFLHLAQPRPFIHGHLTPSSILLDRNLVAKIKVFGSNEGSPESDVRAFGVLIMHLLTGRNWVGLVKEEMMIGGSLVRVLDERAGVWPLNVAQKLADLAVKCMGFPNGPKPKEGLSIGNVTLELNEIRREANEEVARGDSSRFCGGVDKEELMDVPNVFLCPILQEVMKNPHVAGDGFSYELEAIEEWVGSGHDRSPTTNAKLPHLFFTPNHSLRSLIRDWQTKTSSQFPN 814
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju09g1180 814 Gene3D Phosphorylase Kinase; domain 1 450 549 - -
Alju09g1180 814 Coils Coil 410 444 - -
Alju09g1180 814 SMART Ubox_2 741 804 IPR003613 GO:0004842|GO:0016567
Alju09g1180 814 Coils Coil 284 325 - -
Alju09g1180 814 PANTHER OS02G0152300 PROTEIN 11 802 - -
Alju09g1180 814 SUPERFAMILY Protein kinase-like (PK-like) 456 686 IPR011009 -
Alju09g1180 814 Pfam U-box domain 738 807 IPR003613 GO:0004842|GO:0016567
Alju09g1180 814 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 736 812 IPR013083 -
Alju09g1180 814 Gene3D Transferase(Phosphotransferase) domain 1 556 690 - -
Alju09g1180 814 ProSiteProfiles U-box domain profile. 737 811 IPR003613 GO:0004842|GO:0016567
Alju09g1180 814 MobiDBLite consensus disorder prediction 211 239 - -
Alju09g1180 814 ProSiteProfiles Protein kinase domain profile. 477 791 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju09g1180 814 Coils Coil 340 378 - -
Alju09g1180 814 CDD RING-Ubox_WDSUB1-like 739 794 - -
Alju09g1180 814 MobiDBLite consensus disorder prediction 210 239 - -
Alju09g1180 814 Pfam Protein tyrosine and serine/threonine kinase 486 619 IPR001245 GO:0004672|GO:0006468
Alju09g1180 814 SUPERFAMILY RING/U-box 732 811 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju09g1180 Alju-ChrAlju09 34989561 35001982 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju09g1180 4 811 U-box Gene Family AT5G65500 45.864 0.0 689
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-IXb Alju09g1180 PK_Tyr_Ser-Thr 6.5e-22 CL0016