Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju09g1173 ATGACCTTCCATCTCATCTCCAGGTTACGAATTTGGAAAATCATCAGATCATCTATTTCATATGTATTGAATTGGGTCAAAGTCCACGGACTCCACCCTAGTACAACTTCTCTTTTTCGTTCGTCGGCTGCAAGAAAGACTTTACTGGCTATTCATTTTCATTCAATGGCGGCTCTTCCCGGTTCTCTTCAGTTGTTCTGTGGATTGGGACCTTGGAGGAACCAGAATTACAATAAACAACCTGTGCTCCTGAAACAAGAATGCTGGAGACTTCGACTGTCTTGCAATATAAACAGGCCATTGCATGCCTTATCTTGCAAATCTCAGTCTTTCAAGTGTCATTCTTCTCTAGTACCTGGCAGACCAAGTGAACTACCGGTTGTTAAGGTGGCTCGCACAGCACTGACAAGGTCCTGCAATGTTTTACAAGGTAATCCTGTCATAGCAAAGTTAATTCCAGCACTTGGTGTAATCACATTTGCTATATGGGGTGTCGGCCCATTACTATATATGACAAGAAAACTGTTCCTTCAGAGTGATAGCAATTGGAAGAAAAGCAACACAAATTATATAGTAACTTCCTATCTTCGGCCAATAATGTTATGGGTTGGAGCTATACTTATGTGCAGAGCTTTGGAGTCAGTAGTTCTACCTACAGAAACTAGCCAGATTGTTAAGGAAAGGCTTTTGAATTTTGTGAGATCATTGTCAACTGTACTTTCTTTCGCGTATTGTTTATCAAGTGTGATTCAACAAGCACAGAGATTCTTTATTCAGAGTGCTGATGCCAATGAGGCAAGAAATATGGGATTCCAATTTGCTGGCAATGCTCTGTACTCTGCAGTATGGATTGCCGCCTTTTCATTGTTCATGGAACTGCTGGGTTTCTCTACCCAGAAATGGCTAACTGCAGGAGGTCTTGGGACAGTTTTACTTACTCTTGCTGGTCGTGAGATATTTACAAACTTCCTTTCCAGCATGATGATTCACACAACTAGGCCTTTTGTGGCGAATGATTGGATTCAAACAAAGATTGAAGGATATGATGTTTCTGGTACTGTAGAGCGTGTTGGCTGGTGGTCACCAACAATCATAAGAGGTGAAGATCGTGAGGCTCTTCATATTCCAAACCACAAATTTACAATGAATGTTGTGAGGAACCTTAGTCAGAAAACACATTGGAGGATCAAAACCCACTTATGCATCAGTCATTTGGATGTCGGCAAGATTAATAATATTGTTGCTGACATGCGGAAAGTCTTGGCCAAAAATCCTCAAGTAGAGCAGCAGCGGCTGCACAGGAGAGTGTTTCTGGAGGATGTAGATCCTGAAAATCAATCTCTTATGATACTGGTGTCTTGTTTTGTCAAGACCTCACGTCATGAAGAGTATTTTCGCGTTAAGGAAGTTATACTATTAGATCTTCTCAGAGTCATTGGTCATCATGGGGCTCGACTTGCAACACCAGTTCGTACTCTGCAGAAGAGATTTAGTGATGATGACTTAGAGAACATACCCTTTTCAGATTCTTATGTTGATGGTGCTAGAACAGCGCGCAACCGTCCATTATTTTTGATTGAGCCATCTTACAAAACCAACCCTGATGATAAAACAAGAAGCCAAAGAACACAAACCAAAAATTCTACAAAGACTGATGCCAAGGCTGGATCAACAGTGGTTCCAGATTCTAATTCTGGAGAAACTCCTTCGAACTCCAAGTCAGGTTCCAAAGCTGTGATGCCTAATTCTGATGTGAATAGAAAATCCGAAAAAGCGGTGTCATCCATGGTTCACCCTGCAGCACGTGAAGATGATCCGCGGAAACCAGATTCAAATACTAAGGGAAATATCAGGTTGCCAGATATCTCTGCTTCCAATTCCAAAGCAAATTTAAGCCAGGACTTGAACCTTAAGCAGAAAACTGACCCTGACAATATAATGTCATCTTCAGCTTCAAGTAAAGCTGATATAGCACTGGTGGTTCCTCTGGATAAACCACCGAAACAAGAAGACGAAGGGAAACCGGCCGAACAGGGTCCTACATGCAGGCCTGATGTTGAAGAGAATATAGTCCTTGGTGTTGCATTGGAAGGATCAAAGAGAACCCTTCCTATTGAGTATTGA 2124 0.4185 MTFHLISRLRIWKIIRSSISYVLNWVKVHGLHPSTTSLFRSSAARKTLLAIHFHSMAALPGSLQLFCGLGPWRNQNYNKQPVLLKQECWRLRLSCNINRPLHALSCKSQSFKCHSSLVPGRPSELPVVKVARTALTRSCNVLQGNPVIAKLIPALGVITFAIWGVGPLLYMTRKLFLQSDSNWKKSNTNYIVTSYLRPIMLWVGAILMCRALESVVLPTETSQIVKERLLNFVRSLSTVLSFAYCLSSVIQQAQRFFIQSADANEARNMGFQFAGNALYSAVWIAAFSLFMELLGFSTQKWLTAGGLGTVLLTLAGREIFTNFLSSMMIHTTRPFVANDWIQTKIEGYDVSGTVERVGWWSPTIIRGEDREALHIPNHKFTMNVVRNLSQKTHWRIKTHLCISHLDVGKINNIVADMRKVLAKNPQVEQQRLHRRVFLEDVDPENQSLMILVSCFVKTSRHEEYFRVKEVILLDLLRVIGHHGARLATPVRTLQKRFSDDDLENIPFSDSYVDGARTARNRPLFLIEPSYKTNPDDKTRSQRTQTKNSTKTDAKAGSTVVPDSNSGETPSNSKSGSKAVMPNSDVNRKSEKAVSSMVHPAAREDDPRKPDSNTKGNIRLPDISASNSKANLSQDLNLKQKTDPDNIMSSSASSKADIALVVPLDKPPKQEDEGKPAEQGPTCRPDVEENIVLGVALEGSKRTLPIEY 707
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju09g1173 707 MobiDBLite consensus disorder prediction 616 631 - -
Alju09g1173 707 MobiDBLite consensus disorder prediction 523 631 - -
Alju09g1173 707 MobiDBLite consensus disorder prediction 544 590 - -
Alju09g1173 707 PANTHER OW CONDUCTANCE MECHANOSENSITIVE CHANNEL 78 706 IPR045042 -
Alju09g1173 707 Gene3D - 230 333 - -
Alju09g1173 707 MobiDBLite consensus disorder prediction 597 614 - -
Alju09g1173 707 Gene3D - 335 390 IPR023408 -
Alju09g1173 707 MobiDBLite consensus disorder prediction 663 684 - -
Alju09g1173 707 SUPERFAMILY Sm-like ribonucleoproteins 319 389 IPR010920 -
Alju09g1173 707 Pfam Mechanosensitive ion channel 277 485 IPR006685 GO:0016020|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju09g1173 Alju-ChrAlju09 34940220 34946158 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju09g1173 93 706 Mechanosensitive Ion Channel Family AT5G10490 57.073 0.0 676