Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju09g1166 ATGAAGGAGATACTCGACATGTATCATTTGCAATCGAAGAACCTATCAAAACAAGAACTACCGTCTCCTGAATTGTCGCCAGTTAAGAACAGTAATTACACCAGCTTGAGCAAGGAAGTTGCTGAGAAGAGCCGTCAACTAAGGCAGATGAAAGGAGAAGATCTGCAAGGTTTAAATATCCAGGATTTGCAGCAACTAGAGAAGTCTCTCGAATCTGGATTGGGCCGTGTAATAGAAATGAAGGAAGAGAAGATAATGACTGAGATCAGTGACCTCAAGAGGAAGGGAGTGGAATTGATGGAAGAGAATGAGCTGTTAAAGCGTCAAGTGGAACAATTAGCTGATGGCTTTAGGCAAGGTGGTGCCACCGCCGAGTCGGACGTCGTGAATAATGAGGAAGGTCAGTCATCGGAATCTGTCACTATCGTCTGCAACTCCTCTGGACCCCCTCAAGATTACGACAGCTCAGACACTTCGCTTAAGCTGGGGTTACCATATGCTGGCTGA 507 0.4576 MKEILDMYHLQSKNLSKQELPSPELSPVKNSNYTSLSKEVAEKSRQLRQMKGEDLQGLNIQDLQQLEKSLESGLGRVIEMKEEKIMTEISDLKRKGVELMEENELLKRQVEQLADGFRQGGATAESDVVNNEEGQSSESVTIVCNSSGPPQDYDSSDTSLKLGLPYAG 168
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju09g1166 168 Coils Coil 89 109 - -
Alju09g1166 168 ProSiteProfiles K-box domain profile. 26 116 IPR002487 GO:0003700|GO:0005634|GO:0006355
Alju09g1166 168 Pfam K-box region 31 110 IPR002487 GO:0003700|GO:0005634|GO:0006355
Alju09g1166 168 Coils Coil 33 53 - -
Alju09g1166 168 Coils Coil 63 83 - -
Alju09g1166 168 MobiDBLite consensus disorder prediction 117 168 - -
Alju09g1166 168 MobiDBLite consensus disorder prediction 15 37 - -
Alju09g1166 168 MobiDBLite consensus disorder prediction 124 158 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju09g1166 Alju-ChrAlju09 34873755 34876425 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju09g1166 1 168 MADS-box Gene Family AT2G22540 55.000 3.97e-58 180