Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju09g1146 ATGCGTGCGCTCAGGAACGCCCTGATATTGACTCACTGGGTTTCAGTGTTGCTCATCGGCGTTTCCTCACGTTTCTCTCTGCCTCTTCTGCTGTACCAGAACACACCCAATACTAACAACTACTTGGGGATTATTGATTTGAATTGGACGACGACGAAGACGACGGAGGAGGAGGAAGAGGAAGACATGGATTTTGAGGAGCAAGAGGAGGAACTTGGGATGGGACCCACAGGGAGTTACGACTCCATGGGGAACCCGACCCGAATGAAAATGGCGGGTGGCGGGGAAGTCATGGTGGTTCAGGCAACCAGGAATAGTAACAACAAGGCGAGGTATAGGGAGTGCTTGAAGAACCACGCGGTGAGCATCGGCGGCCACGCGCTCGACGGCTGCTGCGAGTTTCTCCCCGCCGGAGCGGAGGGCACGATGGACGCCCTCAAATGCGCTGCCTGTAACTGCCACCGCAATTTCCACCGCAAGGAAACCGACGCGATTGGTATCGGAGCCGGGGACGGGTTTTTGTTGACCAACCATCCTCACTTCCACCAGCAGCATCAACAGCCTCAGTTCTCGCCGTATTACCGGACGCCACCGGCGGGGTATTTGCACGTGGGAGGGCAGCAGAGGAATCCGGCGACGCTGGCGCTGCCGTCAACGTCGGGAGCAGGGTGTGGGGTTCAGAACATAAGGGACGATCAGGAAGATGTTTCGAATCCTAGTGGAGGAGGAGATGGGTCGAAGAAGAGGTTCAGGACGAAGTTCACGGCGGAGCAAAAGGACAAAATGTTGGGATTAGCTGAGAAACTGGGTTGGAGGATTCAGAAGCACGACGAGGCGGTGGTCCAACAGTTCTGTGACGAGACGGGAGTGAAGCGTCACGTTCTCAAGGTTTGGATGCATAACAACAAGCACACTCTTGGTAAGAAGCCCTAG 933 0.5563 MRALRNALILTHWVSVLLIGVSSRFSLPLLLYQNTPNTNNYLGIIDLNWTTTKTTEEEEEEDMDFEEQEEELGMGPTGSYDSMGNPTRMKMAGGGEVMVVQATRNSNNKARYRECLKNHAVSIGGHALDGCCEFLPAGAEGTMDALKCAACNCHRNFHRKETDAIGIGAGDGFLLTNHPHFHQQHQQPQFSPYYRTPPAGYLHVGGQQRNPATLALPSTSGAGCGVQNIRDDQEDVSNPSGGGDGSKKRFRTKFTAEQKDKMLGLAEKLGWRIQKHDEAVVQQFCDETGVKRHVLKVWMHNNKHTLGKKP 310
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju09g1146 310 FunFam Zinc-finger homeodomain protein 2 234 308 - -
Alju09g1146 310 MobiDBLite consensus disorder prediction 55 71 - -
Alju09g1146 310 MobiDBLite consensus disorder prediction 53 83 - -
Alju09g1146 310 Gene3D - 232 307 - -
Alju09g1146 310 NCBIfam ZF-HD homeobox protein Cys/His-rich dimerization domain 111 161 IPR006456 -
Alju09g1146 310 NCBIfam homeobox domain, ZF-HD class 247 303 IPR006455 -
Alju09g1146 310 SUPERFAMILY Homeodomain-like 235 308 IPR009057 -
Alju09g1146 310 MobiDBLite consensus disorder prediction 224 251 - -
Alju09g1146 310 ProSiteProfiles Zinc-finger ZF-HD dimerization-type profile. 112 161 IPR006456 -
Alju09g1146 310 PANTHER ZINC-FINGER HOMEODOMAIN PROTEIN 2 101 306 - -
Alju09g1146 310 Pfam ZF-HD protein dimerisation region 110 162 IPR006456 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju09g1146 Alju-ChrAlju09 34564145 34565476 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju09g1146 63 306 ZF-HD Transcription Factor Family AT4G24660 49.801 3.13e-74 226
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF zf-HD Alju09g1146 ZF-HD_dimer 8.2e-29 No_clan