Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju09g1135 ATGGAAGAAGCTTTTAGGCGTCTCAACGGCCTCAATCCTCAAGACTCCTTCTCCGATCACCACCACCACCACCACAGAAAGTGCTCCTCCGCCGCCAACAAGAGGGCTTCCAGAGATAACGGCGCCCCCGGTGTGAGGTACCGTGGAGTTAGGCGTAGGCCCTGGGGCCGTTACGCAGCCGAGATAAGGGACCCACTGTCCAAGGAGCGGCGTTGGCTCGGTACCTTCGACACAGCGGAGGAAGCCGCCTGTGCCTACGACTGCGCCGCCCGAGCCATGCGTGGCCTTAAAGCTCGCACCAACTTTGTCTACCCAAGTCCCACCTCTTCTCTTCACTCTCTTCCTTACAATCTCTTGCCTCCTTCTATCAACTTTCCCAAACAATCTCAGACGACGTCGTCCGTTAACGTTAACAGGAACCTCCATAACCACCACCACGTGGGAGCTTCTAATTGGTCCAACCCTCGTCCCTGTCGTTCAACCCACCAGAACCGAAACTCAACCTCGAACATGATTATGCACCCTTCTGTAGTTCCTCCCTATTCGTCGTCCTCGTCCTCGTCCACCTGTTCCACGTGTACTTGTCGCCGAGGTTGCTGTTTGATGAATTCTTCTTCCGGTGGGGGCACTAATTCTTCTGCTTCCGTCTCGATGACCACCACAACCCATCAAAATGGAATAATGACGAAGAGTAGTGATTGTGAAGCTGTTGATGAATTTGGGTTCTTTCCAAGAGAATCTTCAGACTCAGGGTTGTTGGAGGAGATTGTTCATAAGTTTATGTTAACTTCAAAGCCCAAGAAACTTGAGCCTACTCCAGAATTACCACCTCAGATTCAACCTCAGCCTCAGTTAGTGCCTGATCCTACGTTTGTTTCTGCTTCTCAATGCTATTACGAAACCGAGAAAGAGAATTTTGGCGTTTATAATTTGGACAACAACCAAGGTTTTCTTCCCATGCAACAACAACAACAGTTTGAGGGTTTTGATGATGAGCAGGCTATGCATTTGGGCAACGGTCAACAGTTCATGATGAACCATGCAGATTTCTCAATCACGCAAGATCTTGTTCGTTATCAAGAGATTCTTAATGCCTTCGCAGCTAGCGTCCAAAATGCTTAA 1122 0.4947 MEEAFRRLNGLNPQDSFSDHHHHHHRKCSSAANKRASRDNGAPGVRYRGVRRRPWGRYAAEIRDPLSKERRWLGTFDTAEEAACAYDCAARAMRGLKARTNFVYPSPTSSLHSLPYNLLPPSINFPKQSQTTSSVNVNRNLHNHHHVGASNWSNPRPCRSTHQNRNSTSNMIMHPSVVPPYSSSSSSSTCSTCTCRRGCCLMNSSSGGGTNSSASVSMTTTTHQNGIMTKSSDCEAVDEFGFFPRESSDSGLLEEIVHKFMLTSKPKKLEPTPELPPQIQPQPQLVPDPTFVSASQCYYETEKENFGVYNLDNNQGFLPMQQQQQFEGFDDEQAMHLGNGQQFMMNHADFSITQDLVRYQEILNAFAASVQNA 373
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju09g1135 373 PANTHER AP2 DOMAIN CLASS TRANSCRIPTION FACTOR 32 209 - -
Alju09g1135 373 FunFam Ethylene-responsive transcription factor 2 46 104 - -
Alju09g1135 373 ProSiteProfiles AP2/ERF domain profile. 46 103 IPR001471 GO:0003700|GO:0006355
Alju09g1135 373 Pfam AP2 domain 46 95 IPR001471 GO:0003700|GO:0006355
Alju09g1135 373 CDD AP2 54 102 IPR001471 GO:0003700|GO:0006355
Alju09g1135 373 MobiDBLite consensus disorder prediction 1 48 - -
Alju09g1135 373 SUPERFAMILY DNA-binding domain 46 103 IPR016177 GO:0003677
Alju09g1135 373 SMART rav1_2 46 109 IPR001471 GO:0003700|GO:0006355
Alju09g1135 373 PRINTS Ethylene responsive element binding protein signature 47 58 IPR001471 GO:0003700|GO:0006355
Alju09g1135 373 PRINTS Ethylene responsive element binding protein signature 69 85 IPR001471 GO:0003700|GO:0006355
Alju09g1135 373 Gene3D AP2/ERF domain 45 104 IPR036955 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju09g1135 Alju-ChrAlju09 34376255 34377376 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju09g1135 1 108 AP2-EREBP Transcription Factor Family AT1G24590 57.937 5.21e-40 142
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Alju09g1135 AP2 9.8e-12 CL0081