Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju09g1128 ATGGCTAAGCTTCTTGGCGCTTATCAACCTCACTCACCGTCTTCATTATCAATCCGTCAACAACACACTACTAAGCCTTTAATCAGCATTTCTCTGCACCGCTTCCATTTTGCTGCTAATTCTAGAATCCCACCTCTTCGCTTCACTTCTCCTTTCAGTTCCCGGCAATTTCTTCTAATCCCTCCAAAATCATCGTCCATAAATAGGGTTTCCCTTCAGAATCATTTAAGCGTTTCAAGGGAAGACCATGGGGAATATGAAGACAGTGTTGACTTTCTGGTGAGGCTTAGAAGATGGTTTGGTGTCCTTCTCTCGATTTTTCCCGGTGGAGGCTGGTGGGACTTCTCCGATGAAGTTAATGTTCAAGGTTTGGCCGAGCCGGTGACTGTTTGGCGCGCGCTTGCCAAAATGTGGGAACTCGTTGCCCATGATAGGTGGGTTATTTTCGCGGCGTTCTCGACTTTGATTCTTTCAGCGGTTTCGGAGATTGCAATACCACATTTCTTAACTGCATCCATCTTCTCCGCTCAGAGCGCGGAAATTACAGTCTTCCGTCGGAATGTGCGTCTCTTGGTTCTACTATGTTTAACTTCTGGAATATGCAGTGGGATACGAGGTTGTTGTTTTGGCATTGCAAACATGATTCTGGTTAAGAGGATGAGAGAAACATTATACTCTTCCCTACTTCTTCAGGATATATCGTTTTTTGACTCTGAAACAGTTGGCGATTTGACAAGCAGGCTTGGGGCAGATTGTCAACAAGTGTCACGTGTTATTGGAAATGATCTTAACTTGATATTGCGCAATGTTCTTCAGGGAGCAGGTGCATTGATCTACCTGTTGGTTTTGTCTTGGCCACTTGGATTATGTACACTGGGCATATGCATCATATTATCAGCTGTTATGCTAATTTATGGAAGGTATCAGAAAAAGGCTGCAAGGTTGGTCCAAGAAGTTACTGCCTCTGCAAATCAAGTAGCTCAGGAAACGTTATCTCTCATTAGGACTGTTCGAGTTCATGGAACTGAAGGAGAAGAACTTGGAAGATACAAATGGTGGCTGGGGATGTTAGCTGATATAAGTTTGCGACAAAGTGCTGCTTATGGATTTTGGAATTTAAGTTTCAACACTCTTTATCATTCAACTCAGGTTATTGCCGTGCTGTTTGGAGGAATGTTCATTCTAGCAGGTCATATTACCGCAGAGAAACTCACAAAGTTCATACTATACAGTGAATGGCTCATTTATTCAACCTGGTGGGTTGGAGACAATATATCCTCTTTGATGCAATCAGTTGGAGCCAGTGAAAAAGTATTTCGATTGATGGATCTCTTACCAAGTAGCCAATTCATAGCAAGGGGGGTGAAGTTACAGAGATTAACGGGGCTTATTGAGTTTATAGATGTTTCTTTTCACTATCCTTCAAGGCCAACGGTACCTGTAGTGCAACATGTCAGCTTTTCTGTTCATCCTGGTGAGGTGGTCGCAATTGTTGGTCTTAGTGGTAGTGGAAAAAGCACACTGGTAAACCTTTTGCTCCGGCTATATGAGCCAACAAATGGCCAGATTTTGATTGATGGCCACCCTCTTAAAGAGTTGGACGTCATGTGGTGGAGAGAAAGAATTGGATATGTGGGACAGGAGCCAAAGCTCTTTCGCACGGGTATTAGTTCAAACATCAGGTATGGATGCACTCAGGATATAAAGCAGGAGGATATTGAATGGGCCGCCAAGCAGGCTTATGCTCATGATTTCATCTCAGCACTTCCTACTGGTTATGAAACACTTGTTGATGATGATCTATTAAGTGGGGGACAAAGGCAGCGAATTGCCATTGCAAGGGCCATTATTAGGGATCCAACTATTTTGGTCCTTGATGAAGCCACCAGTGCTCTGGATGCTGAGAGTGAATATAATGTCCAGGGTGTCTTTCGATCTGTCAGAAGTGACTCAACCACGAGAAGCGTCATAGTCATTGCTCACAGGCTTTCTACCATAAAAGCAGCTGACAAGATCGTGGTAATGGATGGTGGTCAAATTGTTGAGATTGGAAGTCACAGGGAGCTTCTCTTAAAAGATGGTTTGTATGCACGATTGACTAGAAAACAGGCTGACGCAATGTCATGA 2127 0.4363 MAKLLGAYQPHSPSSLSIRQQHTTKPLISISLHRFHFAANSRIPPLRFTSPFSSRQFLLIPPKSSSINRVSLQNHLSVSREDHGEYEDSVDFLVRLRRWFGVLLSIFPGGGWWDFSDEVNVQGLAEPVTVWRALAKMWELVAHDRWVIFAAFSTLILSAVSEIAIPHFLTASIFSAQSAEITVFRRNVRLLVLLCLTSGICSGIRGCCFGIANMILVKRMRETLYSSLLLQDISFFDSETVGDLTSRLGADCQQVSRVIGNDLNLILRNVLQGAGALIYLLVLSWPLGLCTLGICIILSAVMLIYGRYQKKAARLVQEVTASANQVAQETLSLIRTVRVHGTEGEELGRYKWWLGMLADISLRQSAAYGFWNLSFNTLYHSTQVIAVLFGGMFILAGHITAEKLTKFILYSEWLIYSTWWVGDNISSLMQSVGASEKVFRLMDLLPSSQFIARGVKLQRLTGLIEFIDVSFHYPSRPTVPVVQHVSFSVHPGEVVAIVGLSGSGKSTLVNLLLRLYEPTNGQILIDGHPLKELDVMWWRERIGYVGQEPKLFRTGISSNIRYGCTQDIKQEDIEWAAKQAYAHDFISALPTGYETLVDDDLLSGGQRQRIAIARAIIRDPTILVLDEATSALDAESEYNVQGVFRSVRSDSTTRSVIVIAHRLSTIKAADKIVVMDGGQIVEIGSHRELLLKDGLYARLTRKQADAMS 708
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju09g1128 708 ProSitePatterns ABC transporters family signature. 602 616 IPR017871 GO:0005524|GO:0016887
Alju09g1128 708 PANTHER ABC TRANSPORTER B FAMILY 142 700 IPR039421 -
Alju09g1128 708 FunFam Multidrug ABC transporter ATP-binding protein 456 707 - -
Alju09g1128 708 FunFam ABC transporter B family member 26, chloroplastic 130 449 - -
Alju09g1128 708 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 464 702 IPR003439 GO:0005524
Alju09g1128 708 CDD ABC_6TM_TAP 151 438 - -
Alju09g1128 708 Pfam ABC transporter transmembrane region 149 415 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Alju09g1128 708 SUPERFAMILY ABC transporter transmembrane region 136 446 IPR036640 GO:0005524|GO:0016020
Alju09g1128 708 SMART AAA_5 491 679 IPR003593 GO:0016887
Alju09g1128 708 PIRSF ABC_prm/ATPase_B 66 708 - -
Alju09g1128 708 Gene3D - 462 704 IPR027417 -
Alju09g1128 708 Gene3D ABC transporter type 1, transmembrane domain 120 295 IPR036640 GO:0005524|GO:0016020
Alju09g1128 708 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 149 430 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Alju09g1128 708 Gene3D ABC transporter type 1, transmembrane domain 296 461 IPR036640 GO:0005524|GO:0016020
Alju09g1128 708 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 456 703 IPR027417 -
Alju09g1128 708 Pfam ABC transporter 483 630 IPR003439 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju09g1128 Alju-ChrAlju09 34281716 34289365 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju09g1128 219 706 Calmodulin-binding Proteins AT2G36910 35.211 3.87e-76 265