Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju09g1115 ATGGCTTCCCTTAACTTTCTTCCTCCTCCTTTGCTTCTCCCTCTTCTAATAATAATATCAAACTGCTTCATGATCATCAAGGCACAAACCTTTGACAAAGAACCCATGAATTGCTCTGCAACTATCTCCCATTGCAATGCCTCGTTATATCACATCACCAATAATGATAATCTCTCCTCCATAGAAGACATCGCGTCGCGCTACTCCGTCGACGTGTCGAATTTGAAGCCCATAAGGCATCCCAACAATGAAAAAGACGATTACCTTGTTACTGTGTCCTGTACTTGCCTAAATACTAGTGAGCTTAGTGGGTACTTCTATGAAACGACCTACACAGTGTATCCAAATGACACAGCGCAAAATATTTCAAATAATGTTTATAGTGGGCAAACATGGATTCTGGGAAATCATAGCCTTTTGAACATAAGTGAGGCTTTAACTATATATCTTCTCTGTGGGTGTTCCAAGAAGAGTGAGTCTGATGAGATTGTTGTGACGTACACGGTGCAGAAGGATGAAACGCTCTTCACAATTGCTAGTCTTTTGAACTCTACACTGGAAAACATGAAGAACTCGAATAGAATTTTAAATTCAAATCCATCGTTTATTGATGTGGGGTGGGTTCTATTTATTCCCAGTGACTTAAATGGCATTCCATTCCCCAATGATAATCGTGGTCAAGGAAACAAGAGTACCAAAATTAAATTAGTGGTTGGCATATTAGCAGGTTTACTGGCATTGTTTTTGTTACCCACAGCGCTTATACTCATTGTTAGGAGCAAAACACGCAAAGGAGCATCTAAAAAATCAGTTTCCAATAGAACTACTTCAGACCCCTTTCATAAAAAGATTGTGAAAGATGAAACACCATTTGAATCAGAAAAACCAGTAATATTTAGTCTTGAAGAGATTGAAGAGGCTACCGATTACTTTGATGAAACCAGAAAAATTGGATTTGGTGGATATGGAAGTGTGTATTTTGGAGTCATGGGCGAGAAGGAGGTTGCAATAAAGAAGATGAGGTCTAATAAATCCAAAGAATTCTATGCGGAACTCAAGATCTTATGTAAGATCCATCATATCAACATTGTAGAGCTGTTGGGATATGCCAGTGGAGAAGACCACCTCTACTTGGTGTATGAATTTGTTGCAAACGGATCTCTCAGTGATCATCTTCATGATCCATTACTAAGAGGTTATCAGCCTCTTTCATGGAATGCTAGAGTTCAGATTGCTTTGGATGCTGGAAAAGGCCTTGAATACGTGGCAGATTTTGGACTTGCAAAGCTGGTAGAACGAACAAATGATGAAGATACTAATATAGCAACAAGGCTTGTTGGAACACCTGGCTACCTTCCACCAGAATCTCTGAAAGAGCTTAAGACGACTCCAAAAACTGATGTGTTTGCATTTGGAGTGGTTCTGTCAGAGCTGGTAACGGGCAAGCGTGCTTTATTTCGTGACAGCCTAGAGGCCAACAAAATGAAATCCCTTATTACACTTGTCAATAAAATATTCGAAGATAATGACCCTGAGACTGCTCTAGAAAATGTCATAGATCGGAACCTCCTACGTTGCTATCCTCTCGAGGATGTATTAAAGATGGTAGTGTTAGCTGAGAGATGTTTAAGGGAAGACCCGTTGGAGAGGCCAGAAATGAGGCAGGTGGTTGAAGCACTGTCACATCTCATGATGTCTTCCATGGAGTGGGAAGCTTCATTTAGAGAGAAAAGTCAAGTCTTCAACGTCGTATGTAAAGCAAGATGA 1767 0.4024 MASLNFLPPPLLLPLLIIISNCFMIIKAQTFDKEPMNCSATISHCNASLYHITNNDNLSSIEDIASRYSVDVSNLKPIRHPNNEKDDYLVTVSCTCLNTSELSGYFYETTYTVYPNDTAQNISNNVYSGQTWILGNHSLLNISEALTIYLLCGCSKKSESDEIVVTYTVQKDETLFTIASLLNSTLENMKNSNRILNSNPSFIDVGWVLFIPSDLNGIPFPNDNRGQGNKSTKIKLVVGILAGLLALFLLPTALILIVRSKTRKGASKKSVSNRTTSDPFHKKIVKDETPFESEKPVIFSLEEIEEATDYFDETRKIGFGGYGSVYFGVMGEKEVAIKKMRSNKSKEFYAELKILCKIHHINIVELLGYASGEDHLYLVYEFVANGSLSDHLHDPLLRGYQPLSWNARVQIALDAGKGLEYVADFGLAKLVERTNDEDTNIATRLVGTPGYLPPESLKELKTTPKTDVFAFGVVLSELVTGKRALFRDSLEANKMKSLITLVNKIFEDNDPETALENVIDRNLLRCYPLEDVLKMVVLAERCLREDPLERPEMRQVVEALSHLMMSSMEWEASFREKSQVFNVVCKAR 588
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju09g1115 588 SMART LysM_2 166 212 IPR018392 -
Alju09g1115 588 Gene3D LysM domain 164 216 IPR036779 -
Alju09g1115 588 ProSiteProfiles Protein kinase domain profile. 311 565 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju09g1115 588 PANTHER CHITIN ELICITOR RECEPTOR KINASE 1-RELATED 26 422 IPR044812 GO:0019199|GO:0045087
Alju09g1115 588 Gene3D Phosphorylase Kinase; domain 1 290 382 - -
Alju09g1115 588 FunFam Kinase family protein 284 382 - -
Alju09g1115 588 Gene3D Transferase(Phosphotransferase) domain 1 383 584 - -
Alju09g1115 588 SUPERFAMILY LysM domain 165 212 IPR036779 -
Alju09g1115 588 CDD LysM 165 211 IPR018392 -
Alju09g1115 588 ProSitePatterns Protein kinases ATP-binding region signature. 317 339 IPR017441 GO:0005524
Alju09g1115 588 SUPERFAMILY Protein kinase-like (PK-like) 293 560 IPR011009 -
Alju09g1115 588 ProSiteProfiles LysM domain profile. 165 211 IPR018392 -
Alju09g1115 588 Pfam LysM domain 167 212 IPR018392 -
Alju09g1115 588 Pfam Protein tyrosine and serine/threonine kinase 314 422 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju09g1115 Alju-ChrAlju09 34016732 34022594 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju09g1115 291 588 Receptor kinase-like Gene Family AT1G51940 43.373 1.51e-88 285
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LysM Alju09g1115 PK_Tyr_Ser-Thr 5e-17 CL0016