Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju09g1081 ATGCAAAACACACAACTTCTCTGTGTTGTGACTTGGCAGTTCCCTCCAATTTCTACACTTTCACTTTCATCAGAGGGTGAGAGAGGCTTAGAAGAAGCAAGGAGTGCCCTATTTTCAACTATAAAAGCTTCCTTTGTGTCAAAAACAGGATTCATCCTTCAGTATCTCTCTCGGTTTCTTTCTTTCTCTCATTCAAACCCTCGAACTCTTGCACTAATGTCAACACTTAACCGTCTTTTTGGCCTACCAGAGCAAATATGTTACGTTCAATGTGGATTCTGTGGCACCATTTTAATGGTGAGCGTCCCATGCACTAGTTTATCTATGGCGGTCACAGTCAGATGTGGACATTGCACAAGCCTCCTCTCTGTTAATATGATGAAAGCTTCTTTTGTCCCCTTACACCTTTTAGCTTCCTTTTCTCATCTTCAGCCAAAAGAGAAGGGTCCAGAGGAAGAAGCAAACAAGACTTTGGAAAGCCATAACCATAATGGAAAACCCATGATGACCTATTCTGATTGTGAGGAAGAGGATGCAATTCCCATGAGCATTGTGGCAAGCAAACCCCCAGAGAAGAGACAGCGAACACCGTCAGCTTATAACCTCTTCATCAAAGAAGAGATCAGAAGGCTAAAGGCAGAAAACCCAGACATGGCTCACAAAATGGCTTTTAGCACAGCTGCAAAAAATGAGATGAAGAAAGCTACAGCCAGACAGAGCAGCTTGTGGATCTTGAAGATGCCGAGGCTAAAGAAGAGGAGGAGGAGGAGGAAGGAGAAGGCCAAGGTTTCCGTGAAAGAAAGGCTCCAAGGAATTCAATCTGAGCAAGGACACCATTTGAGTGATCAAGAAATAAAGAGAAGCTTATAG 870 0.4345 MQNTQLLCVVTWQFPPISTLSLSSEGERGLEEARSALFSTIKASFVSKTGFILQYLSRFLSFSHSNPRTLALMSTLNRLFGLPEQICYVQCGFCGTILMVSVPCTSLSMAVTVRCGHCTSLLSVNMMKASFVPLHLLASFSHLQPKEKGPEEEANKTLESHNHNGKPMMTYSDCEEEDAIPMSIVASKPPEKRQRTPSAYNLFIKEEIRRLKAENPDMAHKMAFSTAAKNEMKKATARQSSLWILKMPRLKKRRRRRKEKAKVSVKERLQGIQSEQGHHLSDQEIKRSL 289
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju09g1081 289 MobiDBLite consensus disorder prediction 145 167 - -
Alju09g1081 289 SUPERFAMILY HMG-box 186 238 IPR036910 -
Alju09g1081 289 Pfam YABBY protein 83 230 IPR006780 GO:0007275
Alju09g1081 289 Gene3D High mobility group box domain 185 264 IPR036910 -
Alju09g1081 289 MobiDBLite consensus disorder prediction 251 289 - -
Alju09g1081 289 PANTHER PROTEIN YABBY 6-RELATED 79 235 IPR006780 GO:0007275
Alju09g1081 289 MobiDBLite consensus disorder prediction 145 160 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju09g1081 Alju-ChrAlju09 33394657 33396618 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju09g1081 72 230 C2C2-YABBY Transcription Factor Family AT1G23420 65.060 1.74e-59 189
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-YABBY Alju09g1081 YABBY 8.9e-55 CL0114