Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju09g1059 ATGCCAGGCTTGGAGGTAGCAGCAGTGGAGGGATTCAGAACCTTGACTGAGACTAAAGCTTGGGACTATGTTGTAGTATGGAAGTATGGCGATGACCCAACAAGATTTATCGAGTGGATGGGCTGTTGTTGTGTTGGGGGATGCAATGGAAGCAAGAACGAAGAGGAAAAGGAGGAAGAATATAGATTGAGTCGTAGATGTAGGGATAGTCACTTTCAGCATCCAGTGAGAACCAAGGCTTGTCAGGCTCTTGCTCTACTTCCTTATACAATACCACTTTATTCTGGTGTTCATGGAGATGTGGCAATATCAAAACAACCTCAATGGCTCATCCAGGATTCAACAGGAACTCAAGTTTTGATCCCTATTATTGGTGGTATTATAGAGCTCTTCTCAGTAAAGATTGTGCCAAAAGATTCAAGGATCATAGAGTTGATAGCTGCACATTGTTTTGTCTCTATGAAAAATGAAGCCATCTCTGAACATCCACCACTAGATTCGTGCTATCCACAGAGCTTAATTTCTAGCATACATGCATCTGCAGTAGAGGAGTGCAGCTCTCATCCAAGCATTGAAGGATCCTCCAGTGGATCAAATCCTTCAAATGAGGCTTCAAAAGAGCATCAAACAGGTTTCGATTTCCAGTGTGGCACTCTCGAAGAAAATAATCCAGAGTTGGTCAAGAGACCTCAAAGGGAAGGCTATACATCTAAAAATCTTGTCACAGAGAGGAATAGGAGGAACAAGATCAAAGATGGGCTTTACACTCTACGAGCTTTGGTCCCAAAGATAACCAAGATGGATAGGGCATCCATTGTTGGAGATGCCATTGATTATATAAAGGAACTGCAGGAACAAGAAAAAGGACTTAGAGATGAGTTGACAGCTTTGGAAGAAGAGAATTGTGAAATGAACAAACCACAGTCAAGGAGGTCAATATTGAAGGAACAAGGAGGAAACAGAAGTTTGCATCTTGATCATCTCACCCAAAGTTCCTCTCATTCCACAAAAAGGACCCAGATGGAGGTAGAAAAGAGAGTGCAGGTTGAAGTGAACCAGATTGGGAAGATAGAATTTCTTGTGAAGATACATTGTGAGCAGAAGAGTGGAGGGTTTGCAAGATTGATGGAGGATATTCATTTGTTTGGACTGCAGGTAACTGATGCTAATGTGAACACATTTGGTGACAAAGTCATGAATATTCTGACTGTTAAGGCAAACAAGCTTGATATTCACCCAGAGATATTGAGAGAGTACTTAACTCAGCAAGCTGGTTCTCAAGAAAGAGGAGTTGATGTTGAGGTCAAGAAAGCTTAG 1317 0.4184 MPGLEVAAVEGFRTLTETKAWDYVVVWKYGDDPTRFIEWMGCCCVGGCNGSKNEEEKEEEYRLSRRCRDSHFQHPVRTKACQALALLPYTIPLYSGVHGDVAISKQPQWLIQDSTGTQVLIPIIGGIIELFSVKIVPKDSRIIELIAAHCFVSMKNEAISEHPPLDSCYPQSLISSIHASAVEECSSHPSIEGSSSGSNPSNEASKEHQTGFDFQCGTLEENNPELVKRPQREGYTSKNLVTERNRRNKIKDGLYTLRALVPKITKMDRASIVGDAIDYIKELQEQEKGLRDELTALEEENCEMNKPQSRRSILKEQGGNRSLHLDHLTQSSSHSTKRTQMEVEKRVQVEVNQIGKIEFLVKIHCEQKSGGFARLMEDIHLFGLQVTDANVNTFGDKVMNILTVKANKLDIHPEILREYLTQQAGSQERGVDVEVKKA 438
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju09g1059 438 Coils Coil 280 300 - -
Alju09g1059 438 Pfam Helix-loop-helix DNA-binding domain 242 284 IPR011598 GO:0046983
Alju09g1059 438 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 235 304 IPR036638 GO:0046983
Alju09g1059 438 PANTHER TRANSCRIPTION FACTOR SCREAM2-RELATED 142 417 - -
Alju09g1059 438 Gene3D - 236 309 IPR036638 GO:0046983
Alju09g1059 438 Pfam bHLH-MYC and R2R3-MYB transcription factors N-terminal 13 147 IPR025610 -
Alju09g1059 438 MobiDBLite consensus disorder prediction 186 208 - -
Alju09g1059 438 SMART finulus 240 289 IPR011598 GO:0046983
Alju09g1059 438 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 234 283 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju09g1059 Alju-ChrAlju09 33049934 33052045 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju09g1059 91 422 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G10610 31.405 3.73e-44 155
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Alju09g1059 bHLH-MYC_N 9.5e-15 CL0161