Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju09g1022 ATGCAGCTTCATTGTCACTTCGCTAATTTCTCTTCTTCCTCGTCAATCTCACCATACTCAAGCCTCGTTCTGCTTCCTCCAATGGCGCACACTACTCAACTCCCCTGCGATTGTGACGGTGTCTGTATGATCTGCAAGACAAAGCCCGCAGAGGAAGAAAAACTGACATGCAAAACCTGTGTTTCCCAATGGCATGTCAACTGTCTCTCTCACCGTCCGGAGACGATGGCGGAAACGCTTCAGTGGGAATGCTCTGATTGTTCTTCCCCACCTTCCGATTTCCCCTCGGCGACCGTTGGCAAAGCCGTCCTTGATGGTTCCTGTGACTTGATGGCGAAGATCCGTGCGATTGTGGCCGATGATTCTCTGAGTGAGCTTGAAAAGGCTAAGAAGCGCCAAGAACTCTTGAGTGGAAAGGCTGGTCCGGAGGGAGACGAAAGTGGTGGGAAGAAGACTGTAGAAGGTGAAGGGAAGGATGTGTTGGATATTCTTAGCGGGACTCTGAACTGCTCCTTTTGTATGCAGCTACCCGAGAGGCCGGTCACGACTCCATGTGGCCACAACTTCTGTTTGAAGTGCTTTCAAAAGTGGATTGGACAAGGAAAACTAACATGTGCCAAGTGCCGCAGTGCTATCCCTTCCAAAATGGCAAGTCAACCACGTATAAATTCTGCACTCGTTACTGCTATCCGTATGGCCAAAATATCAAAAAACATAGGTGCAGGAGAAACCTCTAGGGTTTATCATTTTGTGCATAACCAAGATAGGCCAGACAAGGCTTATACTACAGAGCGGGCCCAAAGGAAGGGAAAATCAAATGCTTGCAGTGGAAAGATTTTTGTAACTGTGCCTCAGGATCACTTTGGTCCAATCCCAGCTGAGAATGATCCAGTGAGGAATCAAGGTGTGCTGGTTGGTGAATGTTGGGAAGATAGACTTGAATGCCGGCAATGGGGTGTTCACTTCCCTCATGTTAGTGGTATTGCTGGACAATCAAACCATGGTGCACAGTCAGTAGTTCTTTCGGGTGGTTATGTTGATGATGAGGATCATGGAGAGTATTTTCTTTATACTGGAAGTGGTGGTAGAGATTTAAGTGGAAACAAGCGAACAAACAAATTACAATCATTTGATCAGAAGTTTGAAAAGTACAATTTAGCTTTAAAAGTTAGCTGTTTAAAAGGTTACCCAGTTCGAGTTGTAAGATCTCACAAGGAGAAGCGAACCGCGTATGCCCCTGAGAAAGGATTACGTTACGATGGTGTCTACAGAATTGAAAAGTGTTGGCGGAAACAGGGAATGCAGGGCTTCAAAGTTTGTCGCTACTTATTTGTTAGATGTGACAATGAACCTGCTCCATGGACAAGTGATGATCATGGAGATCGTCTCCGAGAATTGCCAGTAATTCCTGAGTTGAAAAAGGCCACAGACTTGGTAGAAAGGAAGGGGAATCCATCATGGGATTTTGATGTGAAAGAATCTTGTTGGAAGTGGAAAATACCACCACCTCCCAGTCAAAAGCATGTAAAAAGTGCGGACCCCAATGAGGTAAAAAGATCGAGGAGGGAAATCAGGATGGCCCAAAATCTTTCAATCAAGGAAAGACTGCTCAAAGGATTTGGTTGCCTTATCTGTAAAGAGGTTATGGCTACTCCTGTGACAACACCTTGTGCACATAATTTTTGTAAGTCATGTTTGGAGGGTGCCTTTGCGGGTAAGTCTTTCGTGAGAGAAAGAAGCAGGGGTGGGAGATCTCTGCGGTCCCAAAAGAACGTAATGAAATGCCCTTGTTGCCCTACTGACATTTCTGATTTTCTTCAAAACATTCAGGTCAATACAGAGTTGTTGGGCTTAATTGAATCATTGAAAGCAGAGGCGGCTGAAGAAAATGGAAATGGAAGTGAGGATGAAAATGGAGCAGCAGAGGAAGACTCTGATGATGCTGAGGCTTCTGTGGATGAAGATAAGGATACCTCGGTTAAGAAGCTCAACGATTCAGCCGAGGAATCTGATGCTAGCAAACAAGAGACAAAGAAACGCGGAGCGACCAATTGTGCAGCCAAAGATAAGTGCAAAAGAAAGAGAGCCGATGCTAAAGAAGTTTCTCCTAAACGTGGCAAAACTAAAAAGGCTGAGGATGATGGAAATGATTCACCAGCAAGTCCTCTTCATTTGTCATCAGACCATTAA 2190 0.4521 MQLHCHFANFSSSSSISPYSSLVLLPPMAHTTQLPCDCDGVCMICKTKPAEEEKLTCKTCVSQWHVNCLSHRPETMAETLQWECSDCSSPPSDFPSATVGKAVLDGSCDLMAKIRAIVADDSLSELEKAKKRQELLSGKAGPEGDESGGKKTVEGEGKDVLDILSGTLNCSFCMQLPERPVTTPCGHNFCLKCFQKWIGQGKLTCAKCRSAIPSKMASQPRINSALVTAIRMAKISKNIGAGETSRVYHFVHNQDRPDKAYTTERAQRKGKSNACSGKIFVTVPQDHFGPIPAENDPVRNQGVLVGECWEDRLECRQWGVHFPHVSGIAGQSNHGAQSVVLSGGYVDDEDHGEYFLYTGSGGRDLSGNKRTNKLQSFDQKFEKYNLALKVSCLKGYPVRVVRSHKEKRTAYAPEKGLRYDGVYRIEKCWRKQGMQGFKVCRYLFVRCDNEPAPWTSDDHGDRLRELPVIPELKKATDLVERKGNPSWDFDVKESCWKWKIPPPPSQKHVKSADPNEVKRSRREIRMAQNLSIKERLLKGFGCLICKEVMATPVTTPCAHNFCKSCLEGAFAGKSFVRERSRGGRSLRSQKNVMKCPCCPTDISDFLQNIQVNTELLGLIESLKAEAAEENGNGSEDENGAAEEDSDDAEASVDEDKDTSVKKLNDSAEESDASKQETKKRGATNCAAKDKCKRKRADAKEVSPKRGKTKKAEDDGNDSPASPLHLSSDH 729
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju09g1022 729 Coils Coil 660 680 - -
Alju09g1022 729 FunFam E3 ubiquitin-protein ligase ORTHRUS 2 269 464 - -
Alju09g1022 729 SMART ring_2 170 208 IPR001841 -
Alju09g1022 729 SMART ring_2 542 598 IPR001841 -
Alju09g1022 729 SMART ring_2 42 87 IPR001841 -
Alju09g1022 729 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 40 89 IPR013083 -
Alju09g1022 729 ProSiteProfiles Zinc finger PHD-type profile. 39 90 IPR019787 -
Alju09g1022 729 MobiDBLite consensus disorder prediction 654 717 - -
Alju09g1022 729 SUPERFAMILY PUA domain-like 272 467 IPR015947 -
Alju09g1022 729 ProSitePatterns Zinc finger PHD-type signature. 36 87 IPR019786 -
Alju09g1022 729 MobiDBLite consensus disorder prediction 631 653 - -
Alju09g1022 729 Gene3D - 269 468 IPR036987 -
Alju09g1022 729 ProSiteProfiles Zinc finger RING-type profile. 170 209 IPR001841 -
Alju09g1022 729 ProSitePatterns Zinc finger RING-type signature. 557 566 IPR017907 -
Alju09g1022 729 Pfam SAD/SRA domain 300 449 IPR003105 -
Alju09g1022 729 ProSiteProfiles Zinc finger RING-type profile. 542 598 IPR001841 -
Alju09g1022 729 ProSiteProfiles YDG domain profile. 298 446 IPR003105 -
Alju09g1022 729 Pfam Zinc finger, C3HC4 type (RING finger) 170 208 IPR018957 GO:0046872
Alju09g1022 729 Pfam RING-type zinc-finger 542 596 IPR027370 -
Alju09g1022 729 SUPERFAMILY RING/U-box 162 234 - -
Alju09g1022 729 FunFam E3 ubiquitin-protein ligase ORTHRUS 2 116 237 - -
Alju09g1022 729 MobiDBLite consensus disorder prediction 134 156 - -
Alju09g1022 729 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 119 237 IPR013083 -
Alju09g1022 729 SUPERFAMILY FYVE/PHD zinc finger 33 92 IPR011011 -
Alju09g1022 729 SMART G9a_1 293 450 IPR003105 -
Alju09g1022 729 SUPERFAMILY RING/U-box 536 624 - -
Alju09g1022 729 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 529 652 IPR013083 -
Alju09g1022 729 PANTHER E3 UBIQUITIN-PROTEIN LIGASE UHRF-RELATED 30 635 IPR045134 -
Alju09g1022 729 MobiDBLite consensus disorder prediction 626 729 - -
Alju09g1022 729 CDD RING-HC_ORTHRUS_rpt1 168 213 IPR047498 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju09g1022 Alju-ChrAlju09 32412750 32419896 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju09g1022 28 632 C2H2 Transcription Factor Family AT5G39550 61.639 0.0 749