Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju09g1020 ATGAAAGGCACGCAGAACCAAACACCTGTTTTGTTCATTCTCCGAAACTTTCTCGCCCGTTCTTTGTTTTTCTCCCCCTTCTTACCTCTCTGCTCTCTCTCTCTCTATATCCAACGCAGCCTCCATTTTCGTCGCCCCATTTCTCTCTCATCACTGCAGCTCAAGACCCAAGAGTTTCTCACTTTGGTAATCCTCTTCATCGCCAGTATAAGAAGAAAGAAGAATATCAAGGAAACGATTACCCTTTCACCCTTGATGGCATCAAGATCATTTGCTAATCTCTTAGACTTGGTTAGTGGAAGTTTATTGGATGTTCCTCACACCCCAAGGCCTCTTCCAAGAGTTATGACAGTTCCTGGAATCATTTCTGACCTAGATGGTCATGGTAATAATGATGCGGATTCAGATGGTAGCTTGTCTGGGTGTCGGGAGCGGAAAATAATAGTTGCAAACATGCTGCCATTGCAGGCTAAAAGAGATGCAGAATCTGCTAAATGGTGTTTCAGTTTGGATGAGGATTCAATTTTATTACAATTGAAAGATGGTTTTTCTCCGGATACTGAGGTAATCTATGTGGGTTCTCTGAAAGTTGAAATAGATGCCAGCGAGCAGGAAGAAGTTGCTCAGAAACTACTGGAGGATTTTAATTGTGTACCTACCTTCTTGCCACATGAACTCCAGAAGAGGTTTTATCTTGGCTTTTGTAAGCAGCAGCTTTGGCCCCTTTTTCATTATATGCTGCCTATGTGCCCAGATCATGGTGACCGCTTTGACCGTGTGCTTTGGCAGGCTTATGTTTCTGCAAATAAAATATTTGCAGACAAGGTCATGGAAATAATCAATCCTGATGATGATTTTGTTTGGGTTCATGACTATCACTTGATGATTTTGCCGACATTTCTTAGGAAGCGATTTAATCGAGTTAAACTTGGATTCTTCCTTCATAGTCCTTTCCCTTCGTCTGAGATTTACAGAACTCTGCCAGTACGAGATGAAATTCTGAGGGGACTGTTGAATTCAGACTTAATTGGTTTTCAGACATTTGATTATGCTCGCCACTTCCTCTCTTGCTGCAGCAGAATGCTGGGTCTGGACTATGAATCTAAGCGGGGACATATAGGTCTTGATTACTTTGGCCGCACAGTATATATTAAAATTTTGCCTGTTGGCATTCACATGGGCAGGCTTGAATCTGTATTAAATCTTCCTTCTACATCTGCTAAAATAAAAGAGATTCAGGAAGAGTTTAAGGGGAGGCAGATGATTCTTGGTGTGGATGATATGGATATCTTCAAGGGCATCAATTTGAAACTTCTAGCCTTGGAGCAGCTGCTGCAGCAGAACCCAGACTTGCTGGGAAAGGTTGTTCTAGTTCAAATTATAAATCCTGCAAGGGGTTCAGGGAAGGATGTTCAAGAAGCAAAGAAGGAAACAAATTTGATTGCCCAAAGGATAAATGATACATATGGCTTGAAGCATTATCAGCCGGTTGTTCTCATCAACCGTCCTGTTCCTCGTTTTGAAAAGAGTGCCTATTATGCTGTAGCAGATTGTTGTATTGTCAATGCTGTGAGGGATGGTATGAATTTAGTCCCGTACAAATATGTTGTCTGCAGGCAAGGAACTGCTCAACTGGACAAAGCATTGGGCAGAAAAAGCGACTCCCCTCGTACCGGCATGCTTGTGGTCTCTGAGTTCATTGGCTGTTCCCCTTCTCTAAGTGGAGCAATTAGGGTCAATCCCTGGGATATTGATGCAGTTGCTGATGCAATGTATTTGGCCATTACGACATCTGATTCAGAGAAGCAATTGAGGCACGAGAAACACTATCGATATGTCAGTTCTCATGATGTGGCTTATTGGGCCCGCAGCTTCATGCAGGATCTAGAGAGGGCATGCGTAGATCATTACACCAAAAGGTACTGGGGAATTGGTTTGGGCCTAGGGTTCAGAGTTGTCTCTCTTTCTCCTGGTTTTAGGAGGTTGTCCATTGACCGTGTTGTTTCAGCTTATAAAATAACTCATAAAAGGGCCATATTTCTTGATTATGATGGTACAATCGTACCGCACTCTTCTATAAATAAAACCCCCGGCCCTGAAGTCATATCTGTGCTGAATACCCTGTGTAACGATGCCAAGAACATTGTGTTCATAGTTAGTGGAAGAGGAAGAGATTCTCTTAGTGAGTGGTTTGCTTCATGCAAGGGGCTGGGACTTGCGGCCGAACATGGTTACTTTTTAAGGTGGAATGGAGACTCAGAATGGGAAACCAGCCACTTGTCTGCTGACCTTGAATGGAAAAATATAGTGGAGCCTGTCATGACTTCATATACAGAGTCAACTGATGGGTCTAACATTGAAACTAAAGAAAGTGGTTTGGTGTGGCATCATCAAGATGCAGACCCTGATTTTGGATCCTGCCAAGCTAAAGAGTTGTTGGATCACCTGGAAAGCGTGCTTGCTAACGAACCAGCTGTCGTCACGAGGGGACATCATATTGTGGAAGTCAAGCCACAGGGAATAAGCAAGGGTTTAGTAGTGGAGCAGGTTCTCTCGACGCTGGTAGATGGCCGTAAAGTGCCAGATTTTGTGGTGTGCATTGGAGATGACAGGTCGGACGAAGACATGTTTGAGAGCATATCGAGGACAGTGTCGTGTCCTCCATTGCCAGTTGCTCCGGAGGTGTTTGCTTGCACTGTTGGTAGCAAGCCTAGCAAGGCAAAGTATTATCTTGATGATACTGCTGATGTTATAAGATTGCTTAAAGGCCTTGCAGCTGCATCAAATCCAATGCCTAGGAATCCACCCCAGTTCAAGGTTTCTTTTGAAAGCACAGCTTGA 2841 0.4368 MKGTQNQTPVLFILRNFLARSLFFSPFLPLCSLSLYIQRSLHFRRPISLSSLQLKTQEFLTLVILFIASIRRKKNIKETITLSPLMASRSFANLLDLVSGSLLDVPHTPRPLPRVMTVPGIISDLDGHGNNDADSDGSLSGCRERKIIVANMLPLQAKRDAESAKWCFSLDEDSILLQLKDGFSPDTEVIYVGSLKVEIDASEQEEVAQKLLEDFNCVPTFLPHELQKRFYLGFCKQQLWPLFHYMLPMCPDHGDRFDRVLWQAYVSANKIFADKVMEIINPDDDFVWVHDYHLMILPTFLRKRFNRVKLGFFLHSPFPSSEIYRTLPVRDEILRGLLNSDLIGFQTFDYARHFLSCCSRMLGLDYESKRGHIGLDYFGRTVYIKILPVGIHMGRLESVLNLPSTSAKIKEIQEEFKGRQMILGVDDMDIFKGINLKLLALEQLLQQNPDLLGKVVLVQIINPARGSGKDVQEAKKETNLIAQRINDTYGLKHYQPVVLINRPVPRFEKSAYYAVADCCIVNAVRDGMNLVPYKYVVCRQGTAQLDKALGRKSDSPRTGMLVVSEFIGCSPSLSGAIRVNPWDIDAVADAMYLAITTSDSEKQLRHEKHYRYVSSHDVAYWARSFMQDLERACVDHYTKRYWGIGLGLGFRVVSLSPGFRRLSIDRVVSAYKITHKRAIFLDYDGTIVPHSSINKTPGPEVISVLNTLCNDAKNIVFIVSGRGRDSLSEWFASCKGLGLAAEHGYFLRWNGDSEWETSHLSADLEWKNIVEPVMTSYTESTDGSNIETKESGLVWHHQDADPDFGSCQAKELLDHLESVLANEPAVVTRGHHIVEVKPQGISKGLVVEQVLSTLVDGRKVPDFVVCIGDDRSDEDMFESISRTVSCPPLPVAPEVFACTVGSKPSKAKYYLDDTADVIRLLKGLAAASNPMPRNPPQFKVSFESTA 946
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju09g1020 946 CDD GT20_TPS 145 630 IPR001830 GO:0003824|GO:0005992
Alju09g1020 946 Pfam Glycosyltransferase family 20 145 630 IPR001830 GO:0003824|GO:0005992
Alju09g1020 946 SUPERFAMILY HAD-like 677 925 IPR036412 -
Alju09g1020 946 Gene3D - 806 934 IPR023214 -
Alju09g1020 946 Gene3D - 676 787 IPR023214 -
Alju09g1020 946 FunFam Trehalose-6-phosphate synthase 2 760 839 - -
Alju09g1020 946 NCBIfam trehalose-phosphatase 675 924 IPR003337 GO:0003824|GO:0005992
Alju09g1020 946 Gene3D Glycogen Phosphorylase B; 135 404 - -
Alju09g1020 946 PANTHER TREHALOSE-6-PHOSPHATE SYNTHASE 113 926 IPR001830 GO:0003824|GO:0005992
Alju09g1020 946 FunFam Alpha,alpha-trehalose-phosphate synthase 399 614 - -
Alju09g1020 946 FunFam alpha,alpha-trehalose-phosphate synthase [UDP-forming] 6 138 397 - -
Alju09g1020 946 Gene3D Glycogen Phosphorylase B; 405 615 - -
Alju09g1020 946 CDD HAD_TPP 678 919 - -
Alju09g1020 946 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 145 633 - -
Alju09g1020 946 NCBIfam HAD-IIB family hydrolase 678 884 IPR006379 -
Alju09g1020 946 FunFam alpha,alpha-trehalose-phosphate synthase [UDP-forming] 6 676 793 - -
Alju09g1020 946 FunFam Alpha,alpha-trehalose-phosphate synthase [UDP-forming] 6 806 937 - -
Alju09g1020 946 Pfam Trehalose-phosphatase 680 914 IPR003337 GO:0003824|GO:0005992
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju09g1020 Alju-ChrAlju09 32276521 32281363 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju09g1020 86 945 Trehalose Biosynthesis Gene Families AT1G60140 72.791 0.0 1353
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Alju09g1020 09 32276521 32281363 Alju09g1020 09 32276521 32281363 ECH