Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju09g0998 ATGCCGGCGCATAGATCGAAGTCGGAGAAGCATGATGCTGCGAAGCAGCCTCGTCGAGATCCCTATGAGGTTCTCGGCGTCTCCTGCAACTCGACAGATCAGGAAATCAAAACAGCTTACCGTAAAATGGCGCTCAAATATCATCCTGACAAGAATGCTAATGATCCTAAGGCGGCTGATATGTTTAAAGAGGTCACCTTTTCATACAATATCCTGTCAGATCCCGACAAGCGGCGTCAATATGACTCGGCTGGTTTTGAGGCCGTTGAATCAGATAGCCAAGAATTGGAGTTGGATCTTTCAAGTTTAGGTGCTGTGAATACAATGTTTGCTGCACTTTTTAGTAAACTTGGCGTGCCAATTAAGACAACTGTATCAGCAACTGTTTTGGAAGAGGCACTTAATGGTGTGGTGACTGTTCGTCCACTTCCCTTAGGCCATCCTACATCTAGAAGGGTTGAGAAGCAATGTGCTCACTTCTATTCAGTTACAATAACAGAAGAGGAAGCACGTGCTGGTTTTGTTTGTCGGGTGCAATCATCTGACAAAAGCAAATTTAAGTTATTATATTTTGACCAAGAAGAGAATAGCGGATTGAGTCTTGCACTCCAGGAAGATAGTGCAAAAACAGGGAAGGTTACCTCTGCTGGAATGTATTTTCTTGGATTTCCTGTTTATCGGCTTGATCAAACAGCAAACTCCATAGCTGCTGCCAAGGATCCTGATACGTCATTTTTCAGAAAACTGGATGGGTTTCAACCATGTGAATTAACAGAATTGAAGGCTGGTACCCATGTATTTGCTGTTTATGGTGACAATTTCTTCAAAAGTGCTAGCTATACGATAGAAGCTCTCTGTGCTGCACCTTTCAGTCAAGAAAAAGAGAGCCTCAGGAATGTAGAAGCTCAAATTTTAACTAAACGAGCAGAACTATCTAAATTTGAGAGTGAATACCAAGAGGTTCTGGCACAATTTACAGAGATGACAAACAGATATGCACAAGAAATGCAAGAGATTGATGGGCTACTGAAGCAAAGAAATGAGATACATGCATCATATACTATTGCTCCATTAAAACGTAGTACAAGTAAGAGTAGGAGTAAGAGTTCTTCCAAGGAGGCTACAGAAGAGAGCCAACCGAGAGAGAAGAAATTTACAAGAGGCAGATCGAAGAAGAAATGGTATAACATCCACTTAAGAGTTGACAAGAGAAAGGCTTGCTGA 1224 0.4191 MPAHRSKSEKHDAAKQPRRDPYEVLGVSCNSTDQEIKTAYRKMALKYHPDKNANDPKAADMFKEVTFSYNILSDPDKRRQYDSAGFEAVESDSQELELDLSSLGAVNTMFAALFSKLGVPIKTTVSATVLEEALNGVVTVRPLPLGHPTSRRVEKQCAHFYSVTITEEEARAGFVCRVQSSDKSKFKLLYFDQEENSGLSLALQEDSAKTGKVTSAGMYFLGFPVYRLDQTANSIAAAKDPDTSFFRKLDGFQPCELTELKAGTHVFAVYGDNFFKSASYTIEALCAAPFSQEKESLRNVEAQILTKRAELSKFESEYQEVLAQFTEMTNRYAQEMQEIDGLLKQRNEIHASYTIAPLKRSTSKSRSKSSSKEATEESQPREKKFTRGRSKKKWYNIHLRVDKRKAC 407
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju09g0998 407 ProSiteProfiles dnaJ domain profile. 20 85 IPR001623 -
Alju09g0998 407 MobiDBLite consensus disorder prediction 1 22 - -
Alju09g0998 407 MobiDBLite consensus disorder prediction 366 384 - -
Alju09g0998 407 MobiDBLite consensus disorder prediction 354 391 - -
Alju09g0998 407 MobiDBLite consensus disorder prediction 1 19 - -
Alju09g0998 407 Gene3D DnaJ domain 4 103 IPR036869 -
Alju09g0998 407 CDD DnaJ 20 74 IPR001623 -
Alju09g0998 407 PRINTS DnaJ domain signature 77 96 IPR001623 -
Alju09g0998 407 PRINTS DnaJ domain signature 57 77 IPR001623 -
Alju09g0998 407 PRINTS DnaJ domain signature 22 40 IPR001623 -
Alju09g0998 407 PRINTS DnaJ domain signature 40 55 IPR001623 -
Alju09g0998 407 Pfam DnaJ domain 20 82 IPR001623 -
Alju09g0998 407 FunFam Chaperone protein dnaJ 16 4 102 - -
Alju09g0998 407 SUPERFAMILY Chaperone J-domain 17 89 IPR036869 -
Alju09g0998 407 PANTHER DNAJ DOMAIN (PROKARYOTIC HEAT SHOCK PROTEIN) 5 406 - -
Alju09g0998 407 ProSitePatterns Nt-dnaJ domain signature. 62 81 IPR018253 -
Alju09g0998 407 SMART dnaj_3 19 77 IPR001623 -
Alju09g0998 407 Coils Coil 297 317 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju09g0998 Alju-ChrAlju09 31709541 31712986 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju09g0998 13 83 C2H2 Transcription Factor Family AT1G74250 39.474 1.55e-10 61.2
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Alju09g0998 09 31709541 31712986 Alju09g0998 09 31709541 31712986 ECH