Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju09g0979 ATGGATAGTCCTACTGCAATTCGACCTTCTACACATGGTTCTGGTTCTGTACCGGGTTCTGCGCCTGGTTGCAATGATTTTAGCCAGCGGGTTAAATTCTTATGTAGCTTTCTAGGTAATATAATGCCTCGTCCCCTAGATGGAAAGCTTCGCTATGTTGGTGGAGAGACACGAATTGTGAGTGTTCCACGAGATATTGGCTATGAGGAGTTGATGAGTAAGATGAGGGAGCTATACGATGAGGCAGCAATCTTAAAGTACCAGCAACCTGACGAGGATCTTGATGCCCTTGTCTCTGTTGTGAATGATGACGACGTGGTTAATATGATGGAAGAGTATGACAAATTAGGTTCAAGTGATGGATTAACTAGGCTCAGAATCTTTTTGTTCTCACAATCTGAACAAGATATTTCTTCACATTTCATTGATGGGGATGAGGGGGATACCGAGAGAAGGTATGTTGATGCATTGAATAATTTAAACGATGCTTCGGATTTTAGGAAGCAGCTACTACGTGAGTTTCTTATGCCTTGTCCGGTTGAGGATATGCATGGAGCTGATCAGTTCTTTAATCCAATCACAGTGGATGATGGCCTTCATTGCCAGAGAAGTGGTGAGGTGCCCTTGACACATTTTAACTTGCATCATCCCACACTACCTCACATTACATCAGGGCAACACCAGCAACCTCATGGTGATTTAGAATTTGACTCTGAAAATGACAATGTGGATACTTCTAAAATTGAGCCTACAAAAGCTGAGGCAGAAGCTATTGCTAGAGGATTGCAGACAATTAAAAATGATGATTTGGAAGAGATCCGCGAACTAGGTTCAGGAACTTATGGAGCTGTCTATCATGGGAAATGGAAAGGTTCTGATGTGGCAATTAAGAGGATAAAAGCTAGCTGTTTTGCTGGAAGCCCCTCGGAAAGAGAAATATTGGTAACATCTTTATTCAATTTCTGGAAAGAGTCGTTAATACTAAGTTCACTTCATCACCCAAATGTTGTGTCCTTCTATGGTATTGTCCGTGATGGCCCTGATGGTTCTTTAGCAACTGTGATGGAGTTCATGATTAATGGATCCCTAAAACAGTTTTTGCATAAGAAAGATAGAACTATAGATCGCCGTAAGAGGCTCATTATAGCTATGGATGCGGCATTTGGGATGGAGTATTTACATGGGCTGAACATTGTGCATTTTGATTTGAAATGTGAGAATCTTTTAATTGGCGACTTGGGTTTATCAAAGGTAAAACAACACACACTAGTATCTGGAGGGGTGAGGGGAACATTGCCATGCATGGCACCTGAACTCCTAAGTGGGAAAAGCAATATGGTGTCAGAGAAGATCGATGTTTATTCATTCGGGATTGTTATGTGGGAACTGCTCACTGGGGATGAACCCTATGCTGATATGCATTGTGCTTCAATAATAGTAGCCAAGGCTATTTTGCCTTGGAAAATTGGAATAATACTCTCTTCTAAATTATCTCTTGGTTTCCTCCTCTTTATTGGCTTTCATGTTCCTGAGGGAGATGTTGGTTTTGAAGATCGAGGAATTGTGAACAACACATTACGCCCCCAAATCCCGAAATGGTGTGATCCTGAGTGGAAGTCTTTGATGGAAAGTTGCTGGGCTTCTGATCCAGCAGAGAGGCCATCCTTCTCAGAAATCTCAAAGAAGCTAAGGGGTATGGCTGCGCAAATGAATGTGAAGTAG 1722 0.4199 MDSPTAIRPSTHGSGSVPGSAPGCNDFSQRVKFLCSFLGNIMPRPLDGKLRYVGGETRIVSVPRDIGYEELMSKMRELYDEAAILKYQQPDEDLDALVSVVNDDDVVNMMEEYDKLGSSDGLTRLRIFLFSQSEQDISSHFIDGDEGDTERRYVDALNNLNDASDFRKQLLREFLMPCPVEDMHGADQFFNPITVDDGLHCQRSGEVPLTHFNLHHPTLPHITSGQHQQPHGDLEFDSENDNVDTSKIEPTKAEAEAIARGLQTIKNDDLEEIRELGSGTYGAVYHGKWKGSDVAIKRIKASCFAGSPSEREILVTSLFNFWKESLILSSLHHPNVVSFYGIVRDGPDGSLATVMEFMINGSLKQFLHKKDRTIDRRKRLIIAMDAAFGMEYLHGLNIVHFDLKCENLLIGDLGLSKVKQHTLVSGGVRGTLPCMAPELLSGKSNMVSEKIDVYSFGIVMWELLTGDEPYADMHCASIIVAKAILPWKIGIILSSKLSLGFLLFIGFHVPEGDVGFEDRGIVNNTLRPQIPKWCDPEWKSLMESCWASDPAERPSFSEISKKLRGMAAQMNVK 573
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju09g0979 573 ProSiteProfiles Protein kinase domain profile. 270 572 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju09g0979 573 Gene3D Phosphorylase Kinase; domain 1 255 358 - -
Alju09g0979 573 CDD PB1_UP2 34 130 - -
Alju09g0979 573 Pfam Protein kinase domain 271 561 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju09g0979 573 ProSitePatterns Serine/Threonine protein kinases active-site signature. 398 410 IPR008271 GO:0004672|GO:0006468
Alju09g0979 573 SUPERFAMILY CAD & PB1 domains 47 139 - -
Alju09g0979 573 MobiDBLite consensus disorder prediction 1 21 - -
Alju09g0979 573 Gene3D - 49 133 - -
Alju09g0979 573 Pfam PB1 domain 46 131 IPR000270 GO:0005515
Alju09g0979 573 SUPERFAMILY Protein kinase-like (PK-like) 257 563 IPR011009 -
Alju09g0979 573 CDD STKc_MAP3K-like 276 563 - -
Alju09g0979 573 ProSitePatterns Protein kinases ATP-binding region signature. 276 297 IPR017441 GO:0005524
Alju09g0979 573 SMART PB1_new 45 132 IPR000270 GO:0005515
Alju09g0979 573 FunFam Octicosapeptide/phox/Bem1p domain kinase superfamily protein 50 132 - -
Alju09g0979 573 Coils Coil 68 88 - -
Alju09g0979 573 PANTHER SERINE-THREONINE PROTEIN KINASE 75 563 - -
Alju09g0979 573 Gene3D Transferase(Phosphotransferase) domain 1 359 573 - -
Alju09g0979 573 SMART serkin_6 270 567 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju09g0979 Alju-ChrAlju09 31193410 31196703 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju09g0979 226 573 MAP Kinase Kinase Kinase AT5G57610 71.111 1.18e-168 505
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-6 Alju09g0979 Pkinase 1.4e-39 CL0016