Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju09g0959 ATGTCTCGCACTTGCTCGCAGTGTGGCAACAATGGCCATAACTCCCGTACTTGTACTCACGGCGGTGGCGGAGGTAGTTGCCGCGGCGCCGATGGTTCGTCTAAGGAGAACGGGATCATGCTGTTCGGCGTGCGACTCACTGAGGGTAATTCGTTCAGGAAAAGCGCTAGTATGACGAATCTGTCGCAGTTTGAGGCTCCGGCTCAGGATTCCAACGCCGTCGACGCTGGTTATGTTTCCGACGATGTCATTCACGCCTCCGGACGGACTCGTGAGCGTAAGAGAGGTGTTCCCTGGACGGAGGAAGAGCATAGGCTATTCCTATTGGGATTACAGAAAGTCGGAAAAGGAGATTGGAGAGGGATTTCTAAGAACTTTGTGAAAACTCGGACGCCGACTCAGGTGGCGAGTCATGCTCAGAAGTACTTCCTTCGTCGCCACAACCAGAATCGAAGGCGTCGTAGATCTAGTCTCTTCGACATTACAACCGATACAGTGATGGAATCCTCTTTAATGGAAGAAAAGCAAGTTCACCAAGAAACGGCGATCCTGCCCGAACATCCACAGTTATACTACGGAGGCTTTCCCAGTTCATCTTTTCCGGCGAAGGTGATGGCCGGAGAGAGACCTGCAAAGGCTATTAGGCCGATGCCAATCTTACCAGTGCCTCCATCATCGAAAATGGCGAATCTAAATCTAAAAGAGAAAGCTCCGATAGATCCCCTGCCATTATCACTGAAGCTGCAAACGTCACCGTCAACATCAAATGAGCAGTCTCCGGCGAGTAGCCAGTCAGGGTCAACGGACTTTCAGGCTATATCTGGAAAGTTCAGCGGCGGTGGAGACAGCATAATCAGCGTGGCTTGA 867 0.5156 MSRTCSQCGNNGHNSRTCTHGGGGGSCRGADGSSKENGIMLFGVRLTEGNSFRKSASMTNLSQFEAPAQDSNAVDAGYVSDDVIHASGRTRERKRGVPWTEEEHRLFLLGLQKVGKGDWRGISKNFVKTRTPTQVASHAQKYFLRRHNQNRRRRRSSLFDITTDTVMESSLMEEKQVHQETAILPEHPQLYYGGFPSSSFPAKVMAGERPAKAIRPMPILPVPPSSKMANLNLKEKAPIDPLPLSLKLQTSPSTSNEQSPASSQSGSTDFQAISGKFSGGGDSIISVA 288
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju09g0959 288 MobiDBLite consensus disorder prediction 242 288 - -
Alju09g0959 288 ProSiteProfiles SANT domain profile. 94 147 IPR017884 -
Alju09g0959 288 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 27 - -
Alju09g0959 288 MobiDBLite consensus disorder prediction 1 29 - -
Alju09g0959 288 CDD SANT 98 143 IPR001005 -
Alju09g0959 288 NCBIfam myb-like DNA-binding domain, SHAQKYF class 94 145 IPR006447 GO:0003677
Alju09g0959 288 SUPERFAMILY Homeodomain-like 93 146 IPR009057 -
Alju09g0959 288 FunFam transcription factor MYB1R1 97 148 - -
Alju09g0959 288 MobiDBLite consensus disorder prediction 1 21 - -
Alju09g0959 288 PANTHER TRANSCRIPTION FACTOR KUA1 1 248 - -
Alju09g0959 288 SMART sant 95 145 IPR001005 -
Alju09g0959 288 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 91 147 IPR017930 -
Alju09g0959 288 Gene3D - 97 148 - -
Alju09g0959 288 ProSiteProfiles Zinc finger CCHC-type profile. 5 18 IPR001878 GO:0003676|GO:0008270
Alju09g0959 288 Pfam Myb-like DNA-binding domain 98 143 IPR001005 -
Alju09g0959 288 MobiDBLite consensus disorder prediction 246 274 - -
Alju09g0959 288 ProSiteProfiles Myb-like domain profile. 91 143 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju09g0959 Alju-ChrAlju09 30450276 30451357 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Alju09g0959 Myb_DNA-binding 3.8e-11 CL0123