Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju09g0930 ATGAGAAGAAATGAACCTGCAGGAGAAGATCTTTTGAAGTTGTCGAAGGAAATAGTGTCTCTGACGGGAGGGTTGCCTTTGGCTCTAGAAGTGTTTGGTTCAATGCTGTTTGGTAAGAGAAAGAAAGAGGAATGGGTTGATGTTGTGAGGAAGCTGAAGCTGACTCGAACTGGGAACGTACATAAAGTGTTGAGGATCAGTTATGATGAGGGGTTAAATGAACAAGAGAAATGCATCTTCCTTGACATTGCTTGTCTGTTCGTTCAGATGAGGATGAAGCAAGAAGATGTTATTGATGTACTGAGAGGTTGTGAATTTGATGGAGAGGAAGCAATCAAAGTTCTCTCAAAAAAATGTCTGATCAAAATCAGACAGGATGAAACCATTTGGATGCATGATCAAATTAGAGATATGGGAAGGCAAATTGTTGTAGACGAAAACCTCGTTGATCCCAGTATGCGTAGTAGATTGTGGGATCGATCTCAAATTCTTGGTGTTTTGAGGAATTTGAAGGGAACAAGCAGAATTCGTGGGATGGTCCTAGACTTCGAGAAAGGAGCTGCTAAAGATCATAAAGTTGAAGAAGCAATTTCTGGGAAGAACCTTCGATGTGGTTCCAGTTTCACAAATGCTGTGATATTCCTTAAACAGATGCAGAATAAATATTTTCAACGAGTTGAGAGAGACATGGAGGCTGGAGTGATTCACACCAAGGCCTTTAAATCAATGGTGAACTTGATGCTGCTTCAGATCAATAATTTGAGATTGGAAGGGAAGTTTAAATCTTTCCCTGCAAAATTGAAGTGGCTACAATGGCAAGGATGCCCATTAAAATGCTTGCCTTCTGATTTTTGGCCACGTGAATTGGCTATCCTTGATCTCACACACGGCAATATTGAAAGTTTGTGGAATCGGAAAGGATGCAAGGCGCCAGAGAACATAATAGTTATGAACCTCTCCGAGTGCTATCGCCTGAAGGCCCTTCCTGATTTGTTTGGGTGCCGACATCTAGAGAAGATTGTTTTAGTGGGCTGCGTTAAACTAAGTATGATTCATGAATCAGTTGGCAATCTGACCACACTTCGTCATTTCAATCTGACTCGTTGTGAAGAACTTACTGAGTTACCCAATGATATATCTGGGTTGGAAAATCTTGAGAGCCTCTGTCTCTCTCGCTGCTACAAGTTGAAATCGTTACCAAGGAACATGGCCAACTTGAAATCACTAAGAAAACTACTTGCTGATGGCACGGCCATAGCAGAGCTGCCTGAGACTATTTTTTGCCTTGAAAAACTTGAAGTTCTTGTTTTAAATGGTTGCCGAAACTTGAAAAGACTACCTGACAACATAACCCATTTGTGTTCTCTGCAAGAGCTGTCTCTCGACGGATCTGGATTAGAAGAACTGCCCAACTCTGTGGGGCATTTGAAAAACCTTGAGAAGCTTGGTTTGATGCATTGCAAATCTCTCAATGAGATTCCTGATTCTATTGGAGATCTTGTTTCACTTCCAAAGCTTCAGCTTAATGGTAGTGCTATTAAAGAGCTTCCTTCTTCAATTGGATCATTGTCTTATCTAAATGAACTCTCTGTAGGAAACTGTAAGTCTCTGAGAAACTTGCCCGAGTCTATTAAGCTTTTGGCTTCTGTTGTTGTGCTTCAGCTAGATGGTACAGCGATCACAGATTTGCCAGATGAGATTGGGGATATGAGATTACTTAAAAAGCTTGAAATGATGAATTGCCAGATGAGATATCTACCTGAATCGATTGGCAACCTCACAGCTCTTACTACCTGGAACATTTACAGAGGTAACATTGTAGAACTGCCAGAGTCCATTGGAAGGCTCGAGAATTTGGTCTTTTTAAACTTGGAACAATGCACAATGCTTAGAAGGCTTCCGCATTCTATAGGACATTTGAAGTCTTTATATAATCTTAGAATGGAGGAAACGGGTCTGACAGAATTACCTCAAAGCTTTGGCATGCTTACCAACTTAAGGACGCTGAAAATGGCCAAGAAGTCAGAAAATAACACGCTGCAGGATTCTTTTGTAATCTCATCTTTTTTCTGCAATATGATATTTCTGAATGATCTGGATGCTCGTGGTTGGAGAATATCTGGGAAAATTCCGAATGATTTTCAGAAATTGTCGTGTTTGGAGACTTTGAAACTAAGCCAAAACAAATTTCACAGCCTTCCTTCCAGTATGGCGGGCCTTTCTGTTCTCAAGGTACTTCATGTTCAAAACTGCATCGAGCTGGTTTCTCTCCCTGCTCTTCCCTTGAGCTTGACGAATCTGAATGCTGCAGACTGTTGTAACTTACAAAGCATTCATGACCTTTCAAATTTGACAAACTTGGAGGATCTAAACTTCACCAATTGTGTAAAATTGGTGGATATTCCTGGTCTTGAACGGTTAGGGTCTTTGAGGAAATTGTTCTTTGGCGGATGCATTACGTGCTCCTCCACAATCCGTAAGAGATTTTCCAAGGTTACACTGAGGAATTTAAAGAACTTGAGCATGCCGGCAACAAGATTACCCAAATGGTTTTCGGGACAAGCTGTAACGTTGTCGAAGCCCAAGAGCCGTGAACTAACTGGTGTAATTATAGGTATCATTCTTTCAATCAACCATGATACATCCAGTGAACTGCGAGTTCAACTTCCAGGAGTAATTGATATCAAAGTAAATGTCCTCAGACGTGGAGAAAATCCATATAATTCAGTATTGGACTTGCGTGGGTTGCCAAGAACGAATGAAGAACACATACACCTTTGCAGGTATCCTGGTTACTCAAAACTCATCTCTATGTTGCAAGACGGTGACACCATTTGTGTGACAGTGAGAGACCCTCCTGTGGATAGGGGGTTAGAGCTGAAAAAATATGGGGTTCATTTGATCTTTGATGGGGATGATGATTATGGTGGAGATGAAGATTCTGTGGACCGAAGTTTACAATCTGTGTCAGAAAAATTGGCCAAGTTTTTCAACACATGCGAAGAAGATAGCTCCAGAGATGGAATTGAGAGTGAAGATGATGATGAGTGCCAGGAGGAATTAGAGAATGAAGCTCAATAA 3081 0.4109 MRRNEPAGEDLLKLSKEIVSLTGGLPLALEVFGSMLFGKRKKEEWVDVVRKLKLTRTGNVHKVLRISYDEGLNEQEKCIFLDIACLFVQMRMKQEDVIDVLRGCEFDGEEAIKVLSKKCLIKIRQDETIWMHDQIRDMGRQIVVDENLVDPSMRSRLWDRSQILGVLRNLKGTSRIRGMVLDFEKGAAKDHKVEEAISGKNLRCGSSFTNAVIFLKQMQNKYFQRVERDMEAGVIHTKAFKSMVNLMLLQINNLRLEGKFKSFPAKLKWLQWQGCPLKCLPSDFWPRELAILDLTHGNIESLWNRKGCKAPENIIVMNLSECYRLKALPDLFGCRHLEKIVLVGCVKLSMIHESVGNLTTLRHFNLTRCEELTELPNDISGLENLESLCLSRCYKLKSLPRNMANLKSLRKLLADGTAIAELPETIFCLEKLEVLVLNGCRNLKRLPDNITHLCSLQELSLDGSGLEELPNSVGHLKNLEKLGLMHCKSLNEIPDSIGDLVSLPKLQLNGSAIKELPSSIGSLSYLNELSVGNCKSLRNLPESIKLLASVVVLQLDGTAITDLPDEIGDMRLLKKLEMMNCQMRYLPESIGNLTALTTWNIYRGNIVELPESIGRLENLVFLNLEQCTMLRRLPHSIGHLKSLYNLRMEETGLTELPQSFGMLTNLRTLKMAKKSENNTLQDSFVISSFFCNMIFLNDLDARGWRISGKIPNDFQKLSCLETLKLSQNKFHSLPSSMAGLSVLKVLHVQNCIELVSLPALPLSLTNLNAADCCNLQSIHDLSNLTNLEDLNFTNCVKLVDIPGLERLGSLRKLFFGGCITCSSTIRKRFSKVTLRNLKNLSMPATRLPKWFSGQAVTLSKPKSRELTGVIIGIILSINHDTSSELRVQLPGVIDIKVNVLRRGENPYNSVLDLRGLPRTNEEHIHLCRYPGYSKLISMLQDGDTICVTVRDPPVDRGLELKKYGVHLIFDGDDDYGGDEDSVDRSLQSVSEKLAKFFNTCEEDSSRDGIESEDDDECQEELENEAQ 1026
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju09g0930 1026 Gene3D Ribonuclease Inhibitor 549 764 IPR032675 -
Alju09g0930 1026 Gene3D Ribonuclease Inhibitor 765 928 IPR032675 -
Alju09g0930 1026 Pfam NB-ARC domain 8 68 IPR002182 GO:0043531
Alju09g0930 1026 SUPERFAMILY L domain-like 130 564 - -
Alju09g0930 1026 MobiDBLite consensus disorder prediction 1002 1026 - -
Alju09g0930 1026 Gene3D Ribonuclease Inhibitor 229 548 IPR032675 -
Alju09g0930 1026 Gene3D - 3 71 IPR042197 -
Alju09g0930 1026 SMART LRR_typ_2 382 405 IPR003591 -
Alju09g0930 1026 SMART LRR_typ_2 547 570 IPR003591 -
Alju09g0930 1026 SMART LRR_typ_2 717 740 IPR003591 -
Alju09g0930 1026 SMART LRR_typ_2 453 476 IPR003591 -
Alju09g0930 1026 SMART LRR_typ_2 406 429 IPR003591 -
Alju09g0930 1026 SMART LRR_typ_2 500 523 IPR003591 -
Alju09g0930 1026 MobiDBLite consensus disorder prediction 1006 1026 - -
Alju09g0930 1026 PRINTS Disease resistance protein signature 22 36 - -
Alju09g0930 1026 PRINTS Disease resistance protein signature 474 490 - -
Alju09g0930 1026 SUPERFAMILY L domain-like 537 841 - -
Alju09g0930 1026 PANTHER LEUCINE-RICH REPEAT-CONTAINING 488 628 - -
Alju09g0930 1026 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 6 83 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju09g0930 Alju-ChrAlju09 29803643 29808697 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju09g0930 381 680 WRKY Transcription Factor Family AT4G12020 29.260 2.50e-11 66.2