Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju09g0911 ATGGATCCAGGAGCTATGATGAACGAGGGTTCGTTTGCGAATGGAGGAGCTAATACGGCGCCGTTTAACCTGGCGGATATCTGGCAATTTCCGATGAATGTCGGTGCGGGCCTTGGGGATTCCGGCGGTGGGTTGGGGTTGAGGAGGCCACAGTTCGGGCATAATTTGGGGCCGCCGCCGCCGTTCGGTGATTATATAAATCGGGATGTACCCGGTAATGATCAAATCAACTCAGAGCAGAGAGGGAATAACAACAATAATAATAATAATAATCATGGAGTCAACAATAATAGGAAGCGTCGTGATTCAGAGGATGAGTCCACCAAGGGCGTCTCCACCAGTAATGGCGGCAATGGCGTGAATGATGGTGATGAAGGAAAACGTCTTAAAGCTTCAGCGAATAGGAATGAGAGTAGGGACACTAAAGCTGAAGCGGAGCCCAGTTCAGGAAAGCCTGCGGAGCAAAATAACCAGCCACCTCCTCCTGAGCCTCCTAAGCAAGATTACATTCATGTTCGAGCAAGAAGAGGTCAAGCTACTGATAGCCATAGTTTAGCAGAAAGAGCTAGAAGGGAGAAGATAAGTGAGAGGATGAAAATTCTTCAGGATTTGGTCCCTGGTTGTAATAAGGTTATTGGGAAAGCGCTGGTCCTGGATGAGATTATAAATTATATCCAATCACTACAGCGCCAAGTTGAGTTCCTGTCTATGAAACTTGAAGCTGTAAATTCAAGACTGAACCCCGGCATCGAAGTCTTTCCTCCAAAAGAGTTTGGTCAACAATCATTTGAAACAGCTGGCCTGGCATTTGGCTCACAAGCTACAAGAGAGTATAGCCGGGGTTCGTCGCCGGAGTGGTTACACATGCAGGTAGGTGGTGGTTTTGAAAGAACGTCTTAG 900 0.4744 MDPGAMMNEGSFANGGANTAPFNLADIWQFPMNVGAGLGDSGGGLGLRRPQFGHNLGPPPPFGDYINRDVPGNDQINSEQRGNNNNNNNNNHGVNNNRKRRDSEDESTKGVSTSNGGNGVNDGDEGKRLKASANRNESRDTKAEAEPSSGKPAEQNNQPPPPEPPKQDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMKLEAVNSRLNPGIEVFPPKEFGQQSFETAGLAFGSQATREYSRGSSPEWLHMQVGGGFERTS 299
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju09g0911 299 PANTHER STEROL REGULATORY ELEMENT-BINDING PROTEIN 77 269 IPR024097 GO:0006355
Alju09g0911 299 Pfam Helix-loop-helix DNA-binding domain 182 229 IPR011598 GO:0046983
Alju09g0911 299 Gene3D - 175 249 IPR036638 GO:0046983
Alju09g0911 299 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 178 228 IPR011598 GO:0046983
Alju09g0911 299 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 176 246 IPR036638 GO:0046983
Alju09g0911 299 CDD bHLH_AtBPE_like 168 253 - -
Alju09g0911 299 SMART finulus 184 234 IPR011598 GO:0046983
Alju09g0911 299 MobiDBLite consensus disorder prediction 123 147 - -
Alju09g0911 299 MobiDBLite consensus disorder prediction 49 168 - -
Alju09g0911 299 MobiDBLite consensus disorder prediction 71 94 - -
Alju09g0911 299 FunFam Basic helix-loop-helix transcription factor 175 247 - -
Alju09g0911 299 Coils Coil 225 245 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju09g0911 Alju-ChrAlju09 29023875 29026484 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju09g0911 1 257 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G59640 57.588 4.56e-79 242
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Alju09g0911 HLH 2.5e-08 No_clan