Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju09g0889 ATGGATCAGCAAAATATGCAAAACCAAAGCATGCATTTGGTTCTTTCTTCTGATGCCAAGCCAAGGCTTAAATGGACTCCGGGGCTTCATCAACGGTTCCTTGATGCTGTTAACCAGCTTGGAGGGGCTGAAAAGGCAACCCCAAAGAGTCTTATGAGGATGATGGGGATTCCAGGACTTACCTTGTACCACCTGAAGAGCCATTTACAGAAATTCAGACTTGGGAAAAGCCCTCAACCAGAAGCCTTGGATGATGATAAACAAGAAGATTATAGAGAAGACCAGAGCAGTGATGGTCATTGCAGCGGGGAAACCACTGTGGGGACCAAAAATCAGATGACGGAAAGCCAGCAGATTGCTCAAGCTCTCCAACTACAAATGGAAGTGCAGAGGAAGCTTTATGAACAAATAGAGGTGCAGAGACATTTGCAGCTTCGGATCGAAGCTCAAGGGAAGTACTTACAATCAGTGCTATTAAAAGCTCAGGAAGCACTTGCAGGGTACAATCCTTCTGCTGCTGGTATAGAACATGCAAAAGCTGAGCTCTCTCAATTAGTCTCAATAATTAACAATGGTTGCCCAAGTTCGCCCATCTCAGAAGTGACAGAAACCGGAGTTTTGAGCTTGAAAGGAGGAGAAAGGAAGCAAAGCAGAGGGACCATGTGTTCATTGGAGAGTTCCTTGACATCTTCTGAAAGCTCAGGGGCAAAGGAGAAGGGAGAGAAGCCTCACAAGTCTAACACAACTTCAGTTGAACTGCAATTGATGACTGTTCACCCAGAAGAAGATAATAAAGAATTGACTGGTGAATCAAACAATCAAGCTTGTGGGAGAAAAAGAAGTGGAACCGCTGATTCTGATGGTTGCTGTGTAGAGCAAGAAATCAGTAAAAGATGCAGCAACTGGTCCAGGAAACATGAGTCGCCTGAATTGCTTGATTTGAACAGTCAGTATCACAGCGACACTGACTCGGACTCAAAGACCATAATAGACTTGAATTGCAGCTCAACTCAAGAGTTTTAG 1023 0.4448 MDQQNMQNQSMHLVLSSDAKPRLKWTPGLHQRFLDAVNQLGGAEKATPKSLMRMMGIPGLTLYHLKSHLQKFRLGKSPQPEALDDDKQEDYREDQSSDGHCSGETTVGTKNQMTESQQIAQALQLQMEVQRKLYEQIEVQRHLQLRIEAQGKYLQSVLLKAQEALAGYNPSAAGIEHAKAELSQLVSIINNGCPSSPISEVTETGVLSLKGGERKQSRGTMCSLESSLTSSESSGAKEKGEKPHKSNTTSVELQLMTVHPEEDNKELTGESNNQACGRKRSGTADSDGCCVEQEISKRCSNWSRKHESPELLDLNSQYHSDTDSDSKTIIDLNCSSTQEF 340
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju09g0889 340 Pfam MYB-CC type transfactor, LHEQLE motif 118 163 IPR025756 -
Alju09g0889 340 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL11 4 284 IPR044848 GO:0003700
Alju09g0889 340 Gene3D - 19 77 - -
Alju09g0889 340 MobiDBLite consensus disorder prediction 78 99 - -
Alju09g0889 340 MobiDBLite consensus disorder prediction 219 234 - -
Alju09g0889 340 Pfam Myb-like DNA-binding domain 22 71 IPR001005 -
Alju09g0889 340 Coils Coil 120 140 - -
Alju09g0889 340 MobiDBLite consensus disorder prediction 209 289 - -
Alju09g0889 340 SUPERFAMILY Homeodomain-like 19 75 IPR009057 -
Alju09g0889 340 MobiDBLite consensus disorder prediction 74 110 - -
Alju09g0889 340 FunFam Two-component response regulator 16 78 - -
Alju09g0889 340 NCBIfam myb-like DNA-binding domain, SHAQKYF class 20 75 IPR006447 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju09g0889 Alju-ChrAlju09 27337133 27338617 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju09g0889 11 298 G2-like Transcription Factor Family AT1G69580 49.669 1.53e-75 234
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Alju09g0889 Myb_DNA-binding 1.2e-05 CL0123