Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju09g0876 ATGGCTCCCAAAAGAGGTGTAAAAGCTCAAGTTGCAACTACTAAGAAGAAGCAGGTGATTGTGAAGAGTATGACTTTTGACAGTTTTGAGAGAATTCTTCATATCAATATACCAACTGGCACTTGTTCTAAGGGCTGTACTGATCACCTTTTATTAATCTCATTTGCAGCAACCAGCCTGTTCAAGATGCTCCTCAAGTACAGGCCTGAAGATAAAGCTGAAAAGAAAGAACGACTCTTGAAGAGAGCTCAGGCAGAGGCAGAAGGAAAACCTGTTGAAGCTAAGAAGCCTGTTGTTGTGAAATACGGACTTAACCACGTCACTTACCTTATTGAGCAGAATAAAGCACAGCTGGTTGTGATTGCGCATGATGTAGATCCGATTGAACTGGTTGTCTGGCTGCCAGCATTGTGCAGGAAGATGGAAATTCCCTACTGCATTGTCAAGGGCAAGGCACGTTTGGGAATGATTGTCCACAAGAAAACTGCATCAGTTCTGTGCTTAACAACCGTCAGGAACGAAGACAAGTTGGAATACTCAAAGATTCTAGAGGCTATCAAGGCCAACTTCAATGACAAGTATGATGAATACAGAAAGAAGTGGGGTGGTGGAATTATGGGTTCTAAATCCCAAGCCAGAACTAAGGCCAAGGAGAGGCTCCTCGCCAAGGAAGCAGCTCAGAGAATGTCTTAA 693 0.4358 MAPKRGVKAQVATTKKKQVIVKSMTFDSFERILHINIPTGTCSKGCTDHLLLISFAATSLFKMLLKYRPEDKAEKKERLLKRAQAEAEGKPVEAKKPVVVKYGLNHVTYLIEQNKAQLVVIAHDVDPIELVVWLPALCRKMEIPYCIVKGKARLGMIVHKKTASVLCLTTVRNEDKLEYSKILEAIKANFNDKYDEYRKKWGGGIMGSKSQARTKAKERLLAKEAAQRMS 230
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju09g0876 230 Gene3D - 52 224 IPR029064 -
Alju09g0876 230 SUPERFAMILY L30e-like 60 201 IPR029064 -
Alju09g0876 230 Pfam Ribosomal protein L7Ae/L30e/S12e/Gadd45 family 87 176 IPR004038 -
Alju09g0876 230 PRINTS Ribosomal protein L7A family signature 157 181 IPR001921 -
Alju09g0876 230 PRINTS Ribosomal protein L7A family signature 96 116 IPR001921 -
Alju09g0876 230 PRINTS Ribosomal protein L7A family signature 62 75 IPR001921 -
Alju09g0876 230 PRINTS Ribosomal protein L7A family signature 189 209 IPR001921 -
Alju09g0876 230 FunFam 60S ribosomal protein L7a 51 205 - -
Alju09g0876 230 PANTHER RIBOSOMAL PROTEIN L7AE FAMILY MEMBER 63 206 - -
Alju09g0876 230 PRINTS Ribosomal protein L7A/RS6 family signature 119 132 IPR018492 -
Alju09g0876 230 PRINTS Ribosomal protein L7A/RS6 family signature 145 159 IPR018492 -
Alju09g0876 230 PRINTS Ribosomal protein L7A/RS6 family signature 135 145 IPR018492 -
Alju09g0876 230 PRINTS Ribosomal protein L7A/RS6 family signature 100 114 IPR018492 -
Alju09g0876 230 ProSitePatterns Ribosomal protein L7Ae signature. 138 155 IPR004037 GO:0042254|GO:1990904
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju09g0876 Alju-ChrAlju09 25865997 25868053 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju09g0876 57 230 Cytoplasmic Ribosomal Protein Gene Family AT3G62870 87.931 8.90e-115 327