Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju09g0869 ATGGGTGGAACCGAGGGCTTAAATTATGGGACCTTCACTGAATTTGGTGTCCCAAGTTTGGCCCTCTTGACTCACTTAGTAACTCCGAGTCTTAACTTTGCCTCCATTTATGAGTGACTCAGTGGAATAGAAGCTCTGGGGAATGGAATAGAAACGGGATTTTCGGATTCTGAGCAAACTGTGAGAATCAATACTCAATACTATAATCCTAAGTGGGTCTATCTGGAATTTTTCGGTGAAGAAGTCATGGAAGAGAGAAGTGATTGTGAGAAGCTTGATGAAGTCATGCTTCCAGGGTTCAGATTTCACCCAACCGATGAGGAGCTTGTTGGGTTCTATCTCAAGAGAAAGATTCAGCAGAGGCCTCTCTCTATAGAGCTCATAAAGCAGCTTGATATCTATAAATATGACCCATGGGATCTTCCAAAGTTAGCAAGCACAGGTGAGAAAGAGTGGTACTTTTACTGTCCAAGAGACAGAAAGTACAGAAACAGTGCGAGGCCTAATAGGGTAACAGGAGCTGGGTTCTGGAAAGCCACAGGTACCGATAGGCCCATATATTCCTCTGAGGGTTCAAAGTGCATTGGGTTGAAGAAATCTCTTGTCTTCTACAAAGGAAGAGCTGCCAGAGGAGTCAAAACTGACTGGATGATGCATGAGTTCAGATTACCTTTTCTCTCTGACTCTTCCTCTTCACCAAAAAAGTTCTCAGAAAGAACCATCCCTGCTAATGTAAGTACCAACTTGTCTCAAAATCTTTCACTAGCCAAGGGATATATATATGAGATGATTCCTTCTATGGTCAAAAAACGTCATTTAACACTGACTTTGGGGTTGCAGGATTCGTGGGCAATCTGCAGAATATTCAAGAAGACAAACTCTACAGCCCAAAGAGCTCTCTCTCATTCCTGGGTCTCTCCCTTACCTCATGAAATGAACACTTCTGAAATGCTAACCAAGGGCGAAGACACTTCCAAGTTTTGTTCAGATCATAACAACATTTCGTCATTGACAAAGAAAACTAGCTTACACAACCAGTTGTTCTTTACCAACCAAAATGACCCCTTAACCACCACCACCACTTGCCCTTCAGATATTGCCTCTTACAAACCCATGCTTAACCCATTGTTGTTTTACAAACCCCTGGGCCAACTACCCTTCATTTCATCAAATAACTCAGACCTTGCGTTTTCATCATCCCCACTTGAACCGTACAGTGCTAAAGCCTGCACCGTGGACATTCCCTCCATGTTACTGAGCATGTCATCATCTTCTGTGCTTGGAGACTTTAGCAGTAAGTGTTCATCAGAGGCTGCAAACTTTGGAGCGTTTCAAGAACAGTACAGCACTAACTCTGGGTATTCATCATCAATAGCTTTACCAGTAATACACAACGGGAATGAATTGGTGAAGACGAATCACCCTAGCACTAATCTGAATGTGAATGTGGTGATCCCTAGAGTGATGGAAGAGCCAGATCACATGAATATGCATGAAGAATGGAAGTCAAATCTGCTCTGGGATAGCTCATCTTGTCCCTGTGATCACGTGCTGCCCTCTACTTATTCTACTACTACCAAGTGCTATACTTAG 1593 0.4306 MGGTEGLNYGTFTEFGVPSLALLTHLVTPSLNFASIYEXLSGIEALGNGIETGFSDSEQTVRINTQYYNPKWVYLEFFGEEVMEERSDCEKLDEVMLPGFRFHPTDEELVGFYLKRKIQQRPLSIELIKQLDIYKYDPWDLPKLASTGEKEWYFYCPRDRKYRNSARPNRVTGAGFWKATGTDRPIYSSEGSKCIGLKKSLVFYKGRAARGVKTDWMMHEFRLPFLSDSSSSPKKFSERTIPANVSTNLSQNLSLAKGYIYEMIPSMVKKRHLTLTLGLQDSWAICRIFKKTNSTAQRALSHSWVSPLPHEMNTSEMLTKGEDTSKFCSDHNNISSLTKKTSLHNQLFFTNQNDPLTTTTTCPSDIASYKPMLNPLLFYKPLGQLPFISSNNSDLAFSSSPLEPYSAKACTVDIPSMLLSMSSSSVLGDFSSKCSSEAANFGAFQEQYSTNSGYSSSIALPVIHNGNELVKTNHPSTNLNVNVVIPRVMEEPDHMNMHEEWKSNLLWDSSSCPCDHVLPSTYSTTTKCYT 530
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju09g0869 530 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 94 345 - -
Alju09g0869 530 ProSiteProfiles NAC domain profile. 96 291 IPR003441 GO:0003677|GO:0006355
Alju09g0869 530 Gene3D NAC domain 105 296 IPR036093 GO:0003677|GO:0006355
Alju09g0869 530 Pfam No apical meristem (NAM) protein 98 223 IPR003441 GO:0003677|GO:0006355
Alju09g0869 530 SUPERFAMILY NAC domain 94 291 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju09g0869 Alju-ChrAlju09 24829129 24833259 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju09g0869 90 439 NAC Transcription Factor Family AT1G26870 53.134 5.71e-107 324
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Alju09g0869 NAM 9.8e-37 No_clan