Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju09g0868 ATGTGGAAGTACAAGCGCGTTCTGTCCGAACTCCGAAACATTCTAAAGGACCAATTTTTTATCAGTCTTGGCGCCAGATTTGAAAATCCACCCAAAATCACCCATGGTTTTCCTTTTCTATTGTCAGTTTCTCCCCTCTATATAAACGTGTTAACTCCCTCATGCCCACTGTACTTTCCAGTTTCTACTCAATCACACCCCTTTATTTTGAAAATTAATTCTGGTCTTTGTGACTCTGAAACCTGGTTTTCCATGGCTAACGGAAGCATGCGGCTGGTTCGATCAAAAAGAAGCAACCGGCTGGAGAATGACGACTCGCCTCCACTGCCGCAGTTTTACAAGTCTGAGAAGCAAGACGGTGATGAAGAAGATATGGGACGGGAGGAACGTTCCGAGAATCAGCCTTCGGCGGAAGGCGGTGGTGGAGGAGAAAAGGGGGCAAAGCAAGAAAGTTTTGATCTTGACACCGAACAAGCGAAAATCGGGGTAAATAAAAAAAGTTTCGATCTTGACACCGAACAAGAAAGTTTTAATCTTGACACCGAACAAGCGAAAATCGGCTCTCTAGCGGAATGCACCGAAATTGTCAAGAAAAGGCGCGGTAGAAAGCGTAAGTCTGAGACGGAGGCCTCAGGGAACGAGGTTTTGGCAGAGGCGACGAGGCGTAGTGCTAGAGTATCGCAGAAACCGTTCTGTCCTGTTTCCTTCGACTATGAAGACGAGGAAGAAGAACCTATAAAAAAGAAAAGACGGAGATGTCAGAAAAAGACGAAAGTTGTATCAAATAAAACGTCAGTGATAGGCGTAGGAGCCGAGGACAATGGTGATTTAGGACATTCGAAGCAGAGTGATCCCGCGGGTGCTGTGAAGGACTGTGGTCAAACTTCAAGGCGTAGGGAGGCAGCTAAAAGCGCAAAGGCAGAACACAAAGTATCAGAGGCTCATGGTTCAATGAGAACGGCTAGATCTTCTTCAGAAAGAAGATCAACTAAAGGCTACACTTTAAGGGCTTCTAAATCTGAAGTTAACAAGCAAGAGATGCCCAAAATAAACAAGAAAGATCCTGAATGGATTGAAAAGGTGTCCTTAATGTGCCATCAGTGTCAGAGAAATGATAAGGGGGAGGTTGTTAGGTGTGCAAAATGTAAGCGGAAAAGATTTTGCATCCTGTGTTTACAGCGGTGGTATCCTCAATTGAGAGTGGAAGATATTGCTGAGGAGTGCCCTGTGTGTCGTGGAAACTGCAATTGCAAAGCATGTCTGCGCTCTGATAAATTCATTAAAACATTGAAGAATGAAGGACCTACAAAAATGAAAAAAAAGAAGGAAGTAGAAAAGAAGGAAGAAAAAATCCTCACAAAGGAGGAAGTTGGACACTGTAAGTATTTGCTATCAGTGCTTCTTCCATATTTGAGGCAGCTGCATGAAGAACAAATGATCGAGAAAGAGAATGAAGCTAAGAGACAAGGCATCTCGCTTTCAGAGCTCCAGGTAGCAAGGACAGATTGCACTGATAATGAGCGTGTTTACTGCGACAATTGTAGAACTTCAATCTTTGATTGTCACCGAAGCTGTCAAGAATGTTCTTTAGACCTCTGTCTGGTCTGTTGCCATGAGATTCGTCAGGGGCAATTGGTTGGAGGTGCAGAGCCAGTTAAGAATGAGTTTATCAGCCGGGGGCTAAATTATATGCATGGTGAGGAAAACGAGTCAACAATAACTACATTAAATGTTGAGACGAAATCTAAGAATCGTGATTGGTCTAGATCGGATTTGAAGGTGACCAGTGATGGTAGCATCCCTTGTCCAAGGTTTCTTGGTGGTTGTTGTAGTTGTAGTCTTGAACTTCGATGTATATTTCATGATAATTGGATTTCTGAACTTGTAAAGAAAGCTGAAAATATGGCCAAAGTGTTTAAGCTTGATGATGCAACACAGATAAGTAACCAGTGGTGTTCATGTTTTGACCAAGATGGTGTCAACAACAATGTTAGAAATGAGAATAGGAGGAAGGCTGCTTCTCGTGAAGATCCCATTGTTACTGACAACTATATATACTGTCCAAGGGCTGGAGATTTAGGATCCTTGGATCTGAAGCATTTTCAGTGGCACTGGAGTAAAGGAGAGCCGGTGATTGTCAGCAATGTGCTTGAATGTACATCTGGTTTAAGCTGGGAACCACTTGTCATGTGGCGTGCATTCCGTCAGATGACTAAAACCAATCATGTTCAACATTTGGAAGTGAAGGTCCTTGATTGCTTGGATTGGTGTGAGGGAGACATCAATATCCACCAATTCTTTGCAGGGTACTCAGAAGGTCGAAAAGATTTTGCTAAGTGGCCTCAGTTATTGAAATTGAAAGATTGGCCTCCTTCTAATTTATTTGAGGAACAATTACCACGTCATTGTGCTGAGTTCATTTCTTCCTTACCATACAAGGAGTATACAAATCCTCATGATGGTGTGCTAAACCTTTATTCCATGTTGTCAAAAAATACTATAAAGCCAGATATTGGTCCAAAGACATATATAGCTTATGGAATTCCTTTGGAGCTTGGGCGGGGTGATTCAGTGACAAAGCTTCATTGTGATATGTCTGATGCAGTGAATGTACTGACTCATACTTCTGAGATTCCCCTTGATGCTGATCTCCTTGCAACAATAGTGGATTTTAAAAAAAAGCATCTTGAACAAGACAGAAAGGAACTATATGCCGATGGTCAGGATGTAGAAGGTTATGTTGAAAATGGAAAAACTACAGATTCTGAAAATGAGTTTCTTGGATATGATTCTGACGAGGGAGGTGCTCTCTGGGATATTTTTAGGAGACAGGATGTCCCTAAACTGCAGGAATACCTTAAGAAGCACTTCAGAGAATTCAGGCATGTCAACTGCATTCAATTAAAGGAGGTTGTTCACCCTATCCATGACCAGACCTTTTATTTGACTATGTACCATAAGAGGAAGCTGAAGGAGGAATATGGAATTGAACCATGGACATTTGTCCAGAAACTGGGAGATGCCGTTTTGATTCCTGCAGGTTGTCCTCACCAAGTCAGAAATCTTAAGTCATGTATCAAGGTTGCTCTCGATTTTGTGTCACCTGAAAGTATAGATGAGTGTATTCATTTAACACAGGAATTTCGCACACTTCCCATAAATCACAGGGCTATTGAGGACAAATTGGAGGTCAAAAAAATGCTCATTCATGCAATGAGCAACGTAGTGGGGAAATTGGAGGGAGCAAGGAAGAATGAAAGCTAA 3264 0.4219 MWKYKRVLSELRNILKDQFFISLGARFENPPKITHGFPFLLSVSPLYINVLTPSCPLYFPVSTQSHPFILKINSGLCDSETWFSMANGSMRLVRSKRSNRLENDDSPPLPQFYKSEKQDGDEEDMGREERSENQPSAEGGGGGEKGAKQESFDLDTEQAKIGVNKKSFDLDTEQESFNLDTEQAKIGSLAECTEIVKKRRGRKRKSETEASGNEVLAEATRRSARVSQKPFCPVSFDYEDEEEEPIKKKRRRCQKKTKVVSNKTSVIGVGAEDNGDLGHSKQSDPAGAVKDCGQTSRRREAAKSAKAEHKVSEAHGSMRTARSSSERRSTKGYTLRASKSEVNKQEMPKINKKDPEWIEKVSLMCHQCQRNDKGEVVRCAKCKRKRFCILCLQRWYPQLRVEDIAEECPVCRGNCNCKACLRSDKFIKTLKNEGPTKMKKKKEVEKKEEKILTKEEVGHCKYLLSVLLPYLRQLHEEQMIEKENEAKRQGISLSELQVARTDCTDNERVYCDNCRTSIFDCHRSCQECSLDLCLVCCHEIRQGQLVGGAEPVKNEFISRGLNYMHGEENESTITTLNVETKSKNRDWSRSDLKVTSDGSIPCPRFLGGCCSCSLELRCIFHDNWISELVKKAENMAKVFKLDDATQISNQWCSCFDQDGVNNNVRNENRRKAASREDPIVTDNYIYCPRAGDLGSLDLKHFQWHWSKGEPVIVSNVLECTSGLSWEPLVMWRAFRQMTKTNHVQHLEVKVLDCLDWCEGDINIHQFFAGYSEGRKDFAKWPQLLKLKDWPPSNLFEEQLPRHCAEFISSLPYKEYTNPHDGVLNLYSMLSKNTIKPDIGPKTYIAYGIPLELGRGDSVTKLHCDMSDAVNVLTHTSEIPLDADLLATIVDFKKKHLEQDRKELYADGQDVEGYVENGKTTDSENEFLGYDSDEGGALWDIFRRQDVPKLQEYLKKHFREFRHVNCIQLKEVVHPIHDQTFYLTMYHKRKLKEEYGIEPWTFVQKLGDAVLIPAGCPHQVRNLKSCIKVALDFVSPESIDECIHLTQEFRTLPINHRAIEDKLEVKKMLIHAMSNVVGKLEGARKNES 1087
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju09g0868 1087 MobiDBLite consensus disorder prediction 293 326 - -
Alju09g0868 1087 SMART cupin_9 799 1049 IPR003347 -
Alju09g0868 1087 ProSiteProfiles Zinc finger RING-type profile. 365 412 IPR001841 -
Alju09g0868 1087 FunFam Transcription factor jumonji domain-containing protein 682 1058 - -
Alju09g0868 1087 ProSiteProfiles JmjC domain profile. 788 1049 IPR003347 -
Alju09g0868 1087 MobiDBLite consensus disorder prediction 98 148 - -
Alju09g0868 1087 SUPERFAMILY Clavaminate synthase-like 697 1071 - -
Alju09g0868 1087 MobiDBLite consensus disorder prediction 115 134 - -
Alju09g0868 1087 Pfam Zinc-finger domain of monoamine-oxidase A repressor R1 362 431 IPR018866 -
Alju09g0868 1087 Pfam JmjC domain, hydroxylase 935 1032 IPR003347 -
Alju09g0868 1087 Gene3D Cupin 691 1058 - -
Alju09g0868 1087 PANTHER JMJC DOMAIN-CONTAINING HISTONE DEMETHYLATION PROTEIN 134 1084 IPR045109 GO:0032454|GO:0033169
Alju09g0868 1087 MobiDBLite consensus disorder prediction 197 335 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju09g0868 Alju-ChrAlju09 24384089 24397639 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Jumonji Alju09g0868 JmjC 1.3e-15 CL0029