Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju09g0783 ATGGCGTCGTCGTACGACTGCGTGGACTACTACAAGATTCTCCAAGTTTCAAGGGAAGCGAACAACGCTGAATTAAAGAACGCGTACAGATCACTGGCCATGATATGGCACCCTGATAAGCATAACCAAAGCCCCATGAAGATGCAAGAAGCAGAAGCAAAGTTCAAACAGATAAAAGAGGCTTTCGAGGTTCTGGGAGACCCTAAAAAGCGAAAGGCTTATGACGAAGGCAAACCAATTCCCCTGAATAATATTTATACTACTGATAATATTACTACTACTGCTACTACTAGTACTACTATGAGGAAGCGTATGGCTCCTTGGGATCTTGGTTCTGATCCTCAGCGTCCTTGTAACTTCTTAGAAACTGTTTTACTGAAGAATGCTGAACATATTGCGCTTAATAAGGCGAAAGCTTCAGCATCAGAACACAATCTGGCTTTCAGCCTGGAGGATATTTACAAAGGATGCGAAAAAAGATTCAGAATCTCAAGGAATGTTATTGATGCTCTTGGAAATACGATCACTATTGATGAAATAGTGGAGGTAAAAGTGAAGCCTGGTTGGAAGAAAGGCACAAAGATAACATTTCGTGGAAAAGCAAACCAAGAACCAGGATCTCCTTCTCCTGCTGATTTGGTAGTTGTGCTAGAAGAAAAACCTCACAAGATTTTCAAAAGGGTAGGGAATGATTTGTTGACCACCCAAAAGATATCACTTTTCGAGGCTCTCACTGGGAAAACAATCAAAGTTACAACGTTGGATGGAAGAGAAATTGAAGTTTCTGTGACAGAAATTGTGAAACCAGACACTGAGATTGTAGTCCAAGATGAAGGCATGCCCTCGGCAAGCAATCCAGGCAAAAAAGGAAACATCAGAATTAAGTTTGATATCATCTTTCCATCTTCATTGCAGCTTACTGCATCACAAAAGGATGAACTCAAAAAGATCTTGAGTGAAGTTGAAGATTAG 972 0.4074 MASSYDCVDYYKILQVSREANNAELKNAYRSLAMIWHPDKHNQSPMKMQEAEAKFKQIKEAFEVLGDPKKRKAYDEGKPIPLNNIYTTDNITTTATTSTTMRKRMAPWDLGSDPQRPCNFLETVLLKNAEHIALNKAKASASEHNLAFSLEDIYKGCEKRFRISRNVIDALGNTITIDEIVEVKVKPGWKKGTKITFRGKANQEPGSPSPADLVVVLEEKPHKIFKRVGNDLLTTQKISLFEALTGKTIKVTTLDGREIEVSVTEIVKPDTEIVVQDEGMPSASNPGKKGNIRIKFDIIFPSSLQLTASQKDELKKILSEVED 323
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju09g0783 323 CDD DnaJ_C 143 304 - -
Alju09g0783 323 PRINTS DnaJ domain signature 50 70 IPR001623 -
Alju09g0783 323 PRINTS DnaJ domain signature 11 29 IPR001623 -
Alju09g0783 323 PRINTS DnaJ domain signature 29 44 IPR001623 -
Alju09g0783 323 Gene3D - 141 220 - -
Alju09g0783 323 CDD DnaJ 9 67 IPR001623 -
Alju09g0783 323 FunFam Dnaj homolog subfamily b member 138 220 - -
Alju09g0783 323 SMART dnaj_3 8 70 IPR001623 -
Alju09g0783 323 ProSitePatterns Nt-dnaJ domain signature. 55 74 IPR018253 -
Alju09g0783 323 PANTHER DNAJ HOMOLOG SUBFAMILY C MEMBER 9 318 - -
Alju09g0783 323 SUPERFAMILY Chaperone J-domain 4 87 IPR036869 -
Alju09g0783 323 SUPERFAMILY HSP40/DnaJ peptide-binding domain 225 305 IPR008971 GO:0006457|GO:0051082
Alju09g0783 323 FunFam DnaJ subfamily B member 13 222 302 - -
Alju09g0783 323 Gene3D - 222 302 - -
Alju09g0783 323 Pfam DnaJ C terminal domain 143 301 IPR002939 -
Alju09g0783 323 Pfam DnaJ domain 9 75 IPR001623 -
Alju09g0783 323 Gene3D DnaJ domain 2 100 IPR036869 -
Alju09g0783 323 ProSiteProfiles dnaJ domain profile. 9 78 IPR001623 -
Alju09g0783 323 SUPERFAMILY HSP40/DnaJ peptide-binding domain 143 223 IPR008971 GO:0006457|GO:0051082
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju09g0783 Alju-ChrAlju09 15275312 15277121 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju09g0783 10 75 C2H2 Transcription Factor Family AT1G74250 40.299 2.21e-09 56.6