Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju09g0759 ATGGGGAACGTCACAACTCCACTCATCCTTCTTCACACCACTTCCTCACAACTTCCCTCTTCTCTGACTCGTTGCTCTGCCTTTGTGTCAAAGAAAATCAAAATGGCTCACATGGAGTTGCTCGTCGCCGCAATGGCTATTCTCACGGTGGTTTCTCCCGTCCATGGCTACGGCGAAGGGTGGACCAACGCCCACGCCACCTTCTACGGGGGAAGTGACGCGTCGGGGACAATGGGTGGTGCTTGTGGGTATGGGAATTTGTACAGCCAGGGTTATGGAACAAACACAGCTGCTCTGAGCACTGCTCTGTTCAACAATGGCCTGAGCTGTGGTTCATGCTTTGAGATTAAGTGTGCCAATGATGCTAAATGGTGCCTCCCTGGCTCCATTGTGGTCACGGCCACCAATTTCTGTCCTCCAAACAATGCCTTACCCAACAATGCCGGTGGCTGGTGTAACCCTCCCCTCCAACACTTTGACCTCGCCCAGCCCGGCTTCCTCCGCATTGCCCAGTACCGAGCCGGAATTGTCCCGGTCGCCTACCGGAGGGTGCCCTGTAGGAGAAAGGGAGGTATCAGGTTCACAATCAATGGACACTCCTACTTCAACCTGGTCCTCATCACCAACGTGGGCGGCGCCGGAGATGTTCATGCGGTGGCTGTGAAAGGGTCAAGAACCGGCTGGATGCCCATGTCAAGGAACTGGGGACAGAATTGGCAGAGCAACAACTACCTTAACGGACAAAGCCTGTCGTTTAAGGTCACAACCAGTGATGGTCGCACTGTGGTGTCTAATAATGTTGCTCCGGCAGGCTGGTCCTTTGGCCAAACCTTCACTGGGGCTCAGTTTCACTAA 855 0.5427 MGNVTTPLILLHTTSSQLPSSLTRCSAFVSKKIKMAHMELLVAAMAILTVVSPVHGYGEGWTNAHATFYGGSDASGTMGGACGYGNLYSQGYGTNTAALSTALFNNGLSCGSCFEIKCANDAKWCLPGSIVVTATNFCPPNNALPNNAGGWCNPPLQHFDLAQPGFLRIAQYRAGIVPVAYRRVPCRRKGGIRFTINGHSYFNLVLITNVGGAGDVHAVAVKGSRTGWMPMSRNWGQNWQSNNYLNGQSLSFKVTTSDGRTVVSNNVAPAGWSFGQTFTGAQFH 284
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju09g0759 284 PRINTS Expansin/Lol pI family signature 174 190 IPR007118 GO:0005576
Alju09g0759 284 PRINTS Expansin/Lol pI family signature 60 75 IPR007118 GO:0005576
Alju09g0759 284 PRINTS Expansin/Lol pI family signature 228 242 IPR007118 GO:0005576
Alju09g0759 284 PRINTS Expansin/Lol pI family signature 266 280 IPR007118 GO:0005576
Alju09g0759 284 PRINTS Expansin/Lol pI family signature 78 96 IPR007118 GO:0005576
Alju09g0759 284 PRINTS Expansin/Lol pI family signature 100 118 IPR007118 GO:0005576
Alju09g0759 284 FunFam Expansin 191 283 - -
Alju09g0759 284 SMART dpbb_1 96 181 IPR007112 -
Alju09g0759 284 PANTHER EXPANSIN-A15 41 283 IPR002963 GO:0009664
Alju09g0759 284 Gene3D - 191 284 IPR036749 -
Alju09g0759 284 ProSiteProfiles Expansin, Cellulose-binding-like domain profile. 201 280 IPR007117 -
Alju09g0759 284 SUPERFAMILY Barwin-like endoglucanases 60 209 IPR036908 -
Alju09g0759 284 ProSiteProfiles Expansin, family-45 endoglucanase-like domain profile. 79 191 IPR007112 -
Alju09g0759 284 Gene3D - 46 187 IPR036908 -
Alju09g0759 284 CDD DPBB_EXPA_N 60 186 - -
Alju09g0759 284 SUPERFAMILY PHL pollen allergen 188 280 IPR036749 -
Alju09g0759 284 Pfam Lytic transglycolase 96 181 IPR009009 -
Alju09g0759 284 PRINTS Expansin signature 237 258 IPR002963 GO:0009664
Alju09g0759 284 PRINTS Expansin signature 149 166 IPR002963 GO:0009664
Alju09g0759 284 PRINTS Expansin signature 266 282 IPR002963 GO:0009664
Alju09g0759 284 PRINTS Expansin signature 166 179 IPR002963 GO:0009664
Alju09g0759 284 PRINTS Expansin signature 202 223 IPR002963 GO:0009664
Alju09g0759 284 PRINTS Expansin signature 118 129 IPR002963 GO:0009664
Alju09g0759 284 PRINTS Expansin signature 130 140 IPR002963 GO:0009664
Alju09g0759 284 PRINTS Expansin signature 91 105 IPR002963 GO:0009664
Alju09g0759 284 PRINTS Expansin signature 190 202 IPR002963 GO:0009664
Alju09g0759 284 FunFam Expansin 51 187 - -
Alju09g0759 284 Pfam Expansin C-terminal domain 192 269 IPR007117 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju09g0759 Alju-ChrAlju09 13453637 13455153 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju09g0759 35 284 Expansin Gene Family AT2G03090 82.072 2.00e-155 432