Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju09g0757 ATGGCTTCTTCCATTTTCTCTGTCCTTCAAGGCTCTGCTTTTCTTTCTTCCCCTGTATCCCACAAAATCAACCCCTTCACCTTTCCGATGCCACCAAAAACCCCACTAGTTCACCTCAGAAAACCTCTCTCCGCCAAATCCCTTACTTCTGTCGAAATTGATACATCATTGTCGCCGGCGATTCGGACATTCTGGCAGTGGCTATGGGAGGAAGGGGTCATCTCTTCGAAGACGCCGGTGGAGCCCGGCGTCGTGCCGGAAGGCCTCGGACTTATTGCTAGGAGAGACATTTCGCGAAACGAGGTCGTTTTGCAGGTGCCCAAGAGATTATGGATAAACCCTGATGCGGTCGCAGCTTCGGAGATTGGGAACGTGTGTAGCGGATTGAAGCCTTGGATGTCGGTTGCTCTGTTCTTGATTAGAGAGAGATCGAGGGATGAGTCTGTTTGGAAGCATTACTTCAAGATTCTCCCAGAGGTCACTGATTCGACAATATATTGGTCAGAGGAGGAGCTCTCTGAGCTTCAAGGTACTCAACTACTGAATACAACACTAGCCGTGAAAGAATATGTACAGAATGAGTTTCTGAAACTGGAAGAAGAAATCATACTCCCTAATAAGAAGCTTTTCCCTTCTCCAATCACTCTGGATGACTTCTTCTGGGCATTTGGAATTCTCAGATCAAGGGCTTTCTCTCGCCTTCGCAATGAAAATCTAGTGGTTATTCCACTTGCAGACTTGATAAATCATAGTGTCAGAGTAGCTACAGAAGATCATGCCTATGAAATTAAAGGGCCAGCAGGTCTTTTCTCTTGGGATTACTTGTTTTCTCTAAGGAGCCCTCTTTCTGTCAAGGCTGGGGAGCAGATACTTATTCAATATGATTTGAAGAAAAGCAATGCAGAGTTGGCTCTAGACTACGGCTTCATTGAACCAAATTCAAACAGGAATGCATATACACTAACGCTACAAATATCTGAATCAGACCCTTTTTATGATGACAAACTAGACATTGCTGATTCCAATGGTTTTGGTGAGACTGCATATTTCGACATCTTCTTTGACCGACCACTTCCACCAGGACTGCTTCCATATCTGCGTCTGGTGGCACTTGGTGGCGCTGATGCTTTCTTGTTGGAATCTATATTCAGAAATTCCGTTTGGGGTCATCTTGAGTTACCCGTAAGCCGTGACAATGAGGAGCTAATATGTCGAGTTGTTCAAGATGCCTGCAAATCTGCCCTTGCTGGTTATCCCACTACCATTGAAGAGGATGAGAAGTTAAAAGAAGAAAAGCTAGACTCAAGGCTGGCAATTGCTGTGGGAATAAGAGAAGGAGAAAAGAAGGTGCTGCAGCAGATTGAAGGTATCTTCAAGGAGAAAGAGTTGGAGTTGGATCTGTTAGAATATTATCAAGAAAGGAGGCTCAAGGATCTTGGTCTTTGTGGAGAAAGTGGTGAGATCCTTGGGGATCTCAGCAAGTTCATGTAA 1491 0.4494 MASSIFSVLQGSAFLSSPVSHKINPFTFPMPPKTPLVHLRKPLSAKSLTSVEIDTSLSPAIRTFWQWLWEEGVISSKTPVEPGVVPEGLGLIARRDISRNEVVLQVPKRLWINPDAVAASEIGNVCSGLKPWMSVALFLIRERSRDESVWKHYFKILPEVTDSTIYWSEEELSELQGTQLLNTTLAVKEYVQNEFLKLEEEIILPNKKLFPSPITLDDFFWAFGILRSRAFSRLRNENLVVIPLADLINHSVRVATEDHAYEIKGPAGLFSWDYLFSLRSPLSVKAGEQILIQYDLKKSNAELALDYGFIEPNSNRNAYTLTLQISESDPFYDDKLDIADSNGFGETAYFDIFFDRPLPPGLLPYLRLVALGGADAFLLESIFRNSVWGHLELPVSRDNEELICRVVQDACKSALAGYPTTIEEDEKLKEEKLDSRLAIAVGIREGEKKVLQQIEGIFKEKELELDLLEYYQERRLKDLGLCGESGEILGDLSKFM 496
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju09g0757 496 Gene3D - 311 475 IPR036464 -
Alju09g0757 496 Pfam SET domain 88 294 IPR001214 GO:0005515
Alju09g0757 496 PANTHER UNCHARACTERIZED PUTATIVE METHYLTRANSFERASE 60 442 - -
Alju09g0757 496 FunFam Ribulose-1,5 bisphosphate carboxylase/oxygenase large subunit N-methyltransferase, chloroplastic 311 475 - -
Alju09g0757 496 Gene3D set domain protein methyltransferase, domain 1 57 310 - -
Alju09g0757 496 ProSiteProfiles SET domain profile. 71 295 IPR001214 GO:0005515
Alju09g0757 496 CDD SET_RBCMT 80 310 IPR044431 GO:0016279|GO:0018022
Alju09g0757 496 FunFam Ribulose-1,5 bisphosphate carboxylase/oxygenase large subunit N-methyltransferase, chloroplastic 57 309 - -
Alju09g0757 496 SMART set_7 78 301 IPR001214 GO:0005515
Alju09g0757 496 SUPERFAMILY RuBisCo LSMT C-terminal, substrate-binding domain 318 489 IPR036464 -
Alju09g0757 496 Pfam Rubisco LSMT substrate-binding 327 451 IPR015353 -
Alju09g0757 496 ProSiteProfiles Plant LSMT protein-lysine methyltransferase family profile. 12 494 IPR011192 GO:0009507|GO:0030785
Alju09g0757 496 PIRSF RMT_SET 2 495 IPR011192 GO:0009507|GO:0030785
Alju09g0757 496 SUPERFAMILY SET domain 58 317 IPR046341 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju09g0757 Alju-ChrAlju09 13262861 13267865 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju09g0757 58 258 NAC Transcription Factor Family AT3G56570 29.524 8.19e-09 55.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Alju09g0757 SET 3.4e-09 No_clan