Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju09g0748 ATGGTGAAACCGAGGAAACTACACAGTGAAGAAGAAATGAAGAAACACAGTGAAGAAGGAGAAAGTAATATTGAGTGGCGAGAAGCAGCAGCCATGGCAGCGAGTCTTCTAAAAGCTCGAAGAACAGGAAGAAAGAGATTCATTGGGGTTCGTCAGAGACCTTCAGGGAGATGGGTGGCTGAAATAAAAGACACAATTCAGAACATAAGAGTTTGGTTAGGGACTTATGATACTGCAGAAGAAGCTGCAAGAGCTTATGATGAAGCTGCTTGCTTGCTTCGTGGAGCCAACACTCGCAGAAACTTCTGGCCTTCTCACTATAATTCTAACTCCCCAGCAAACAATCCAGTTCTTCCCAGAAAGATTGCTAATCTCATCCTTCTTCGGCTCAAAGCTCGAAACCTTGCTTCTTCTTGTCATCATTTTCCCAGTAACCAAACAAAAGAAGAAGAAAAGCCAAAGACCGAGCTTGATCATTTTCTTGATGGGTTTGATGGTGGTGAATTTTTTAGTAGTGAGTTTTCTTGTGATTTTCCCAGTAACAACCAAACAGGTCTAGAAGAACCCTACCAGTTGAACAGCTTTCTAGAAGAGTCAGACAATAGTTTTCTCACAGATGTAGTCAGTTTTAGATCAGGAAACAAAACTAACTTGTTGGATGAAGAAGTAGGGTTTAATGAAGAAAACCATGGGCAGGAGAAGAAGGTGGATGAGGAAAAGATTGAAAGTGGGAGGAAAAAAGAAATTTTTGAGGAGGAATATTCTGATATGGGGTTCATGGATTTTCAGTTTTTGGATAACTTGGGATCTATTTGTGATTCTTCTCCATTTGAGGTAGCAGAAGAGATGATGGGGCCAATAATAATGGATCAGAAAGATGAAGAAGTATATGAAAATAATGATGAAGCATCATTTCTAATAGAAAGTTTTAGGATGAAATATGAACGGAAATTCTCAGCTTGTCTTTATACCTACGGTGGAGTTTCCGAGTGCTTGAGGCTGCAATTTGGATCAGAAAATTTCTGA 1026 0.3977 MVKPRKLHSEEEMKKHSEEGESNIEWREAAAMAASLLKARRTGRKRFIGVRQRPSGRWVAEIKDTIQNIRVWLGTYDTAEEAARAYDEAACLLRGANTRRNFWPSHYNSNSPANNPVLPRKIANLILLRLKARNLASSCHHFPSNQTKEEEKPKTELDHFLDGFDGGEFFSSEFSCDFPSNNQTGLEEPYQLNSFLEESDNSFLTDVVSFRSGNKTNLLDEEVGFNEENHGQEKKVDEEKIESGRKKEIFEEEYSDMGFMDFQFLDNLGSICDSSPFEVAEEMMGPIIMDQKDEEVYENNDEASFLIESFRMKYERKFSACLYTYGGVSECLRLQFGSENF 341
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju09g0748 341 ProSiteProfiles AP2/ERF domain profile. 46 103 IPR001471 GO:0003700|GO:0006355
Alju09g0748 341 CDD AP2 45 102 IPR001471 GO:0003700|GO:0006355
Alju09g0748 341 PANTHER SHN SHINE , DNA BINDING / TRANSCRIPTION FACTOR 11 234 - -
Alju09g0748 341 FunFam ethylene-responsive transcription factor RAP2-11 45 104 - -
Alju09g0748 341 Pfam AP2 domain 46 95 IPR001471 GO:0003700|GO:0006355
Alju09g0748 341 Gene3D AP2/ERF domain 45 103 IPR036955 GO:0003700|GO:0006355
Alju09g0748 341 PRINTS Ethylene responsive element binding protein signature 47 58 IPR001471 GO:0003700|GO:0006355
Alju09g0748 341 PRINTS Ethylene responsive element binding protein signature 69 85 IPR001471 GO:0003700|GO:0006355
Alju09g0748 341 MobiDBLite consensus disorder prediction 1 23 - -
Alju09g0748 341 SUPERFAMILY DNA-binding domain 46 104 IPR016177 GO:0003677
Alju09g0748 341 SMART rav1_2 46 109 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju09g0748 Alju-ChrAlju09 12991925 12992950 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju09g0748 44 126 AP2-EREBP Transcription Factor Family AT5G19790 66.265 2.22e-30 114
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Alju09g0748 AP2 4.2e-15 CL0081