Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju09g0742 ATGGAAGAGACAGACAACAAGCCCAATGCTAACAAGAAGTTCATAACAAAAAGAAGAAGCTTGAGAGGCGGAGCCAACAACCCTCATGAACATCATTATCATCATCACTATAATCATCTTCATCATCAGCATCAGCTTCTGCTAAAACAATACTCGACTCAGTTTGGGTTCTGTTTCCAGAACGAGTATCAGAGGTACTACCCAGCTCTTCTTCCTCTACCTCCTCTTCTACCTCTGCAACTAGCTTTGACGACGCCGTCGTTCACTCAAAACCAGACCTTCAAATCGAAAACCCATTCACAGAAGTCTCCATGCAAGCTCAATAATGCTCCCTTTGCTGCCTCGTCTTATAGCGAAGTCTCAGCAGACACAGTTACTCATGCTCCCAAGGAGTCTCATCAGCAAGCCAAGGCGTCCCTTAAAGGAGATAATGAGAAGAAACTCATACCTGCAAGAAAACCACAGCCACTAGTTGCCGTAAGGAGGCCAGATTCCGGTGGTAAAGAGGGCTCTGTGATCTCTCTCCTTGCCAACCACTTTCTAGTCAAGTTTGATTCATCACAAAAAATATACCATTACAATGTTGAAATCACCCCCAATCCATCCAAGCAAGTTGCCCGAGTAATCAAAGAGAAGTTTGTTAATAATAATTCTGCTGTGCTTTCTGGTACTCATCCAGCATATGATGGGCATAAGAATCTTTATAGCTCTGTTGAATTCCAAAACGACAAGCTTGAGTTCTACGTAAGCCTGCCAATCCCTGTGAGCAAGAGCTCATCACCTGAGAGAGAAATATGTGACTTGAAAGAGAGGCATGAACAGCTTAAACTGTTCAGAATAAATATAAAACTAGTCTCTAAGATCAATGGGAAGGAGTTGGCAAAATACTTGAGCAAAGAGGAAGATGATTGGATTCCACTTCCACAGGATTATCTCCATGCTTTGGATGTAGTTCTGAGGGAGAGTCCAACTGAGAAGTGTATACCTGCTGGTAGGTCTTTCTATTCAACTTCAATGGGAAGAACCAAAGAGATTGGAGGAGGAGCTTCTGGGTTGAGAGGATTCTTTCAGAGTCTTAGACCAACTCAACAAGGACTTGCCCTCAATGTTGATTTTTCTGTAACTGCTTTCCATGAAAGCATAGGAGTGATTCCGTACTTGCAGAAGCGTCTCGAGTTCCTTCGAGATCTTTCTCAAAGGAAGACGAGAAGTTTAACAGGTGAAGAGAGGAAAGAAGTGGAGAAGGCATTGAAGAACATCAGGGTCTTTGTTTGTCATAGAGAGACTGTTCAGAGATATCGCGTCTATGGCTTAACTGAGGAGGCTACCGAAAATCTTTGGTTCACTGACAGGGATGGAAAGAATCTGAGGCTTGTGAACTATTTTAAAGATCACTATAACTATGACATACAATTTAGTAAATTGCCATGCTTGCAAATTAGTAGGAGCAAACCATGTTATCTTCCTATGGAGCTTTGTGTCATCTGTGAAGGCCAAAAGTTCCTTGGAAAGCTTTCTGATGATCAAACTGCAAAAATACTCAAGATGGGATGCCAAAGACCAAGAGAACGAAAAGCCATCATTGAAGGAGTCATGAGGGGGCCTGTGGGGCCAACTAGTGGCAACCAGGAAAGAGAATTCAACCTCCAAGTATCAAGAGAAATGACTCGTTTATCTGGGAGAATTCTCCATCCTCCCAAGCTAAAACTTGGGAATGGAGGTCATGTGACGAAGCTAGTTCCTTCACGGCATGACCGCCAGTGGAACCTTCTGGATGGTCATGTCTTTGAGGGAACTAGAATTGAAAGGTGGGCATTAATAGGCTTTGGTGGTACACCTGAACAGAAGTCCAATGTCGCTAGATTTATAAGCCAGCTATCTCAAAGGTGTGAAGAAATGGGCATTTTTCTTAACAAGAACACAATTGTTAGCTCCCATTTTGAATCAGCCCAGGTTCTTAATAATGTCTCTCTTCTGGAATGTAAGCTCGAAAATATCCTGAGAACTGCCTCAAACAATCTACAGCTGCTTATTTGTGTTATGGAGAGGAAACACAAAGGGTATGCAGATTTGAAAAGAATTGCAGAGACAAGAATTGGGGTTGTGAGCCAATGCTGCTTGTATCCAAATCTCAGCAAATTAAGCTCACAATTTTTGGCAAATTTGGCTCTCAAAATCAATGCCAAAGTTGGTGGATGCACTGTTGCCCTGTACAACTCACTTCCTTCTCAAATTCCACGGCTCTTCAAGTATGACGAACCAGCTATATTCATGGGTGCTGATGTAACTCATCCTCATCCACTTGATGATCATAGTCCATCGGTTGCTGCGGTTGTCAGCAGCATGAATTGGCCTACTGCGAACAAATATATTTCAAGAATAAGGTCACAAACACACCGGCAAGAAATCATCCAGGATCTTGGTGCAATGGTGAAGGAGTTACTAGATGATTTCTGTCAGGAGGTAAAGAAACTCCCTGGGAGAATAATTTTCTTTAGAGATGGGGTTAGTGAAACCCAATTCTATAAAGTTCTTCAAGATGAACTACAATCCATCAGAGGGGCATGTTCTAGATTTCCTGGTTATAAACCATTCATTACTTTTGTAGTAGTACAGAAGAGGCATCACACAAGGCTGTTCCCCTTTGAAACTGATGATCAGTCATCCACAAAAAATCATAATCATTGTTATGAGAATATTCCACCAGGGACTGTGGTTGACTCCGTGATAACTCACCCGAAGGAGTTTGATTTCTATCTTTGCAGCCACTGGGGCATGAAAGGAACAAGCAGGCCAACTCATTACCATGTTTTGTGGGATGAAAACCAGTTTACTTCTGATGAACTCCAGAAACTGGTCTACAACCTATGCTATACTTTTGTTAGATGCACAAAGCCAATTTCCTTGGTTCCTCCTGCTTATTATGCCCATTTAGCTGCATACAGAGGCAGACTCTACCTTGACAGGTCAGATTTTTCCTCTGGTTTGTCTAAAGGTATCTCTTCATTGTCTAGAGCTGCACCTCCAAAGACAACACCTCTTCCAAAACTTAGTGAGAACATCAAGAAGCTCATGTTCTACTGCTAA 3087 0.4234 MEETDNKPNANKKFITKRRSLRGGANNPHEHHYHHHYNHLHHQHQLLLKQYSTQFGFCFQNEYQRYYPALLPLPPLLPLQLALTTPSFTQNQTFKSKTHSQKSPCKLNNAPFAASSYSEVSADTVTHAPKESHQQAKASLKGDNEKKLIPARKPQPLVAVRRPDSGGKEGSVISLLANHFLVKFDSSQKIYHYNVEITPNPSKQVARVIKEKFVNNNSAVLSGTHPAYDGHKNLYSSVEFQNDKLEFYVSLPIPVSKSSSPEREICDLKERHEQLKLFRINIKLVSKINGKELAKYLSKEEDDWIPLPQDYLHALDVVLRESPTEKCIPAGRSFYSTSMGRTKEIGGGASGLRGFFQSLRPTQQGLALNVDFSVTAFHESIGVIPYLQKRLEFLRDLSQRKTRSLTGEERKEVEKALKNIRVFVCHRETVQRYRVYGLTEEATENLWFTDRDGKNLRLVNYFKDHYNYDIQFSKLPCLQISRSKPCYLPMELCVICEGQKFLGKLSDDQTAKILKMGCQRPRERKAIIEGVMRGPVGPTSGNQEREFNLQVSREMTRLSGRILHPPKLKLGNGGHVTKLVPSRHDRQWNLLDGHVFEGTRIERWALIGFGGTPEQKSNVARFISQLSQRCEEMGIFLNKNTIVSSHFESAQVLNNVSLLECKLENILRTASNNLQLLICVMERKHKGYADLKRIAETRIGVVSQCCLYPNLSKLSSQFLANLALKINAKVGGCTVALYNSLPSQIPRLFKYDEPAIFMGADVTHPHPLDDHSPSVAAVVSSMNWPTANKYISRIRSQTHRQEIIQDLGAMVKELLDDFCQEVKKLPGRIIFFRDGVSETQFYKVLQDELQSIRGACSRFPGYKPFITFVVVQKRHHTRLFPFETDDQSSTKNHNHCYENIPPGTVVDSVITHPKEFDFYLCSHWGMKGTSRPTHYHVLWDENQFTSDELQKLVYNLCYTFVRCTKPISLVPPAYYAHLAAYRGRLYLDRSDFSSGLSKGISSLSRAAPPKTTPLPKLSENIKKLMFYC 1028
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju09g0742 1028 Gene3D - 748 1028 IPR036397 GO:0003676
Alju09g0742 1028 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 2C 150 989 - -
Alju09g0742 1028 SMART DUF1785_2 328 380 IPR014811 -
Alju09g0742 1028 CDD PAZ_argonaute_like 391 496 - -
Alju09g0742 1028 SMART Piwi_a_2 676 988 IPR003165 GO:0003676
Alju09g0742 1028 SMART PAZ_2_a_3 388 528 IPR003100 GO:0005515
Alju09g0742 1028 SUPERFAMILY Ribonuclease H-like 669 988 IPR012337 -
Alju09g0742 1028 CDD Piwi_ago-like 545 987 IPR045246 -
Alju09g0742 1028 FunFam Argonaute 10 562 738 - -
Alju09g0742 1028 Gene3D - 562 738 - -
Alju09g0742 1028 ProSiteProfiles PAZ domain profile. 388 497 IPR003100 GO:0005515
Alju09g0742 1028 FunFam Protein argonaute 7 375 501 - -
Alju09g0742 1028 MobiDBLite consensus disorder prediction 1 31 - -
Alju09g0742 1028 FunFam protein argonaute 10-like 745 1028 - -
Alju09g0742 1028 Pfam PAZ domain 391 513 IPR003100 GO:0005515
Alju09g0742 1028 ProSiteProfiles Piwi domain profile. 676 988 IPR003165 GO:0003676
Alju09g0742 1028 Pfam N-terminal domain of argonaute 173 319 IPR032474 -
Alju09g0742 1028 Pfam Piwi domain 677 984 IPR003165 GO:0003676
Alju09g0742 1028 Pfam Argonaute linker 1 domain 330 378 IPR014811 -
Alju09g0742 1028 SUPERFAMILY PAZ domain 375 533 IPR036085 GO:0005515
Alju09g0742 1028 Gene3D paz domain 374 501 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju09g0742 Alju-ChrAlju09 12866793 12870507 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju09g0742 167 1028 Eukaryotic Initiation Factors Gene Family AT1G48410 41.786 0.0 644