Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju09g0733 ATGGTTTTGTTTGGCCAACATATTCGATTGGGTTTGAAGGATAATGTTTCACCGAATTCGCCGCTTCCTCGCTTACTCTCTCCCACTTTCTCTCTCTACTCTCATCCTTCTACTCCTTCTCTGGTTTTGTTCGGAGCCATGTCGGACGAGGAGCATCACTTCGAGTCTAAAGCTGATGCCGGAGCTTCCAAGACCTTCCCCCAGCAAGCTGGTACCATCCGCAAGAACGGTTACATTGTTACCAAAAACAGGCCTTGCAAGGTTGTAGAAGTTTCAACTTCCAAAACTGGTAAGCACGGACATGCTAAGTGCCACTTCGTTGGTATTGACATCTTCACTGGGAAAAAGCTTGAAGATATTGTTCCATCTTCCCACAACTGTGATGTCCCACATGTCAACCGTACTGACTACCAGCTGATTGACATCTCTGAGGATGGATTTGTGAGTCTTCTGACTGATTCTGGTGACACCAAGGATGATCTTAGGCTTCCAACCGATGAAAATCTGCTTAAGCAGATCAAGGATGGTTTCGCCGAGGGTAAAGATCTGGTCGTGAGTGTCATGTCTGCCATGGGAGAGGAGCAGATTTGTGCCCTGAAGGACATTGGCCCCAAGTAA 618 0.4725 MVLFGQHIRLGLKDNVSPNSPLPRLLSPTFSLYSHPSTPSLVLFGAMSDEEHHFESKADAGASKTFPQQAGTIRKNGYIVTKNRPCKVVEVSTSKTGKHGHAKCHFVGIDIFTGKKLEDIVPSSHNCDVPHVNRTDYQLIDISEDGFVSLLTDSGDTKDDLRLPTDENLLKQIKDGFAEGKDLVVSVMSAMGEEQICALKDIGPK 205
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju09g0733 205 CDD S1_eIF5A 132 202 - -
Alju09g0733 205 FunFam Eukaryotic translation initiation factor 5A 47 131 - -
Alju09g0733 205 FunFam Eukaryotic translation initiation factor 5A 132 204 - -
Alju09g0733 205 Pfam Eukaryotic elongation factor 5A hypusine, DNA-binding OB fold 131 200 IPR020189 GO:0003723|GO:0003746|GO:0043022|GO:0045901|GO:0045905
Alju09g0733 205 SMART eIF_5a_2 131 200 IPR020189 GO:0003723|GO:0003746|GO:0043022|GO:0045901|GO:0045905
Alju09g0733 205 SUPERFAMILY Translation proteins SH3-like domain 61 139 IPR008991 -
Alju09g0733 205 ProSitePatterns Eukaryotic initiation factor 5A hypusine signature. 96 103 IPR019769 GO:0003723|GO:0003746|GO:0043022|GO:0045901|GO:0045905
Alju09g0733 205 NCBIfam translation initiation factor IF-5A 64 199 IPR001884 GO:0003723|GO:0003746|GO:0043022|GO:0045901
Alju09g0733 205 PANTHER TRANSLATION INITIATION FACTOR 5A FAMILY MEMBER 47 203 IPR001884 GO:0003723|GO:0003746|GO:0043022|GO:0045901
Alju09g0733 205 Gene3D - 47 131 IPR014722 -
Alju09g0733 205 Gene3D - 132 204 IPR012340 -
Alju09g0733 205 SUPERFAMILY Nucleic acid-binding proteins 132 202 IPR012340 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju09g0733 Alju-ChrAlju09 12652613 12655613 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju09g0733 47 205 Eukaryotic Initiation Factors Gene Family AT1G13950 88.679 3.58e-102 290