Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju09g0691 ATGGAGGAGACAAGGAAGTTCGTGTGCAGGTTCTGCAACAAGAGGTTCCCAAGTGGGAAGTCTCTGGGTGGTCACATTAGAACCCACATGAATCAACATTCAAGAAATAGGGCCATTGCTGATTCAAGCAAGTTTGAAAGTCGTGATGTTGATGATGAAGCTGCGGGAAAGAAGATGAAGAAGAGAGATTTAAGTTCAGATTATGGGCTCAGAGAGAATCCCAGAAAAACAAAGAGGTTTGTTCATAATCATCCCTTCTTCACTTTACATCATAAGGAGAAGTTCTGTAGAGAATGTGGGAAAGGATTTTCTTCTTTGAAAGCTCTATGTGGTCACATGGCGTGTCACACTTCTGATAAACAGAAATTAGCAATAATGGATGATGCTCAATCTGATACCGAAACTTCTGATCCAGAGGATTTAAAGAGAACAGGGTTCATGACCCTTAATAATAGGAATAATAATAACCCAACTTCTTCTTCTGTGTCAGAGGTTGAACAAGAAGAAGAAGAAGGAGTAGAAGAGGTGGCTATTTGCTTGATGTTGTTGTCTAAGGGTTTTTATAGCCATAAAGGTGGTTTTGATTTGGACAAAGAGTCTAATTCTGATAACTATTCTGCAATTTTAGAGGCCAAAGCCAAGTCACACTCTGATGATGCCAGAATTGGTATAAATGATGGTCGCAATAAGGTTAAGAACTCTGTTCATAATGATACTTCTGAGATTGTGAAGGTGGGAAAGGACAAGACGAAGTTGAAGTTTTTAGATTCTGGGTATTCTAGATATGGTTCCAAAAATGAAGATTCAAATGTTTCAATTCATGGGGTTTTCAGGAATGATGTTTTTAATGGACCAAAAGTGAAAGATGGGTATCGATATAAGGATTATGATGTCTCAGAACCAAGGAAGATGATGAACAACAGAAGCAGGAACAGTAGTGAATCCAAGAAACTAGTGTTGGGAAATTTAGACAAGTTTGATGATTTATTTAACAGTGCCAAACAAGAATATGTTGGTAACAATTTGGATGACAAAGTTTCCCGTAAGAAGGAGAAGAAAACCATTTTTCCTAATCATGAAGTCGTCTACAAGAAAGACTCATATGACTCAGAATCATCATCATATGACAGTACTGATTCTGATTCTTTTCCTTATTCTTCTTATCAGAAGCCTAAGAGCAGTAACAAGCTGGCCAAGAGCAAGAAAGTAATGAAGTCGTCAAAGAAAACAAAGGAGCATGAGTGCCCAATTTGTAACAGAACTTTCAGGTCAGGTCAAGCCTTGGGAGGTCACAAAAGGTCCCATCTTGTAGGTGGATTTGAAGAGAACAACAACAACAACAACAATGGATTAATAGTCCATCAAGAATCTCCTTCTGTTGTTCCTTGCCTGATTGATCTTAATCTACCTGCTCCTGCTGATGAATAG 1428 0.3838 MEETRKFVCRFCNKRFPSGKSLGGHIRTHMNQHSRNRAIADSSKFESRDVDDEAAGKKMKKRDLSSDYGLRENPRKTKRFVHNHPFFTLHHKEKFCRECGKGFSSLKALCGHMACHTSDKQKLAIMDDAQSDTETSDPEDLKRTGFMTLNNRNNNNPTSSSVSEVEQEEEEGVEEVAICLMLLSKGFYSHKGGFDLDKESNSDNYSAILEAKAKSHSDDARIGINDGRNKVKNSVHNDTSEIVKVGKDKTKLKFLDSGYSRYGSKNEDSNVSIHGVFRNDVFNGPKVKDGYRYKDYDVSEPRKMMNNRSRNSSESKKLVLGNLDKFDDLFNSAKQEYVGNNLDDKVSRKKEKKTIFPNHEVVYKKDSYDSESSSYDSTDSDSFPYSSYQKPKSSNKLAKSKKVMKSSKKTKEHECPICNRTFRSGQALGGHKRSHLVGGFEENNNNNNNGLIVHQESPSVVPCLIDLNLPAPADE 475
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju09g0691 475 ProSiteProfiles Zinc finger C2H2 type domain profile. 94 121 IPR013087 -
Alju09g0691 475 SUPERFAMILY beta-beta-alpha zinc fingers 4 33 IPR036236 -
Alju09g0691 475 SUPERFAMILY beta-beta-alpha zinc fingers 410 436 IPR036236 -
Alju09g0691 475 MobiDBLite consensus disorder prediction 146 168 - -
Alju09g0691 475 ProSiteProfiles Zinc finger C2H2 type domain profile. 7 34 IPR013087 -
Alju09g0691 475 PANTHER C2H2-LIKE ZINC FINGER PROTEIN 1 474 - -
Alju09g0691 475 ProSitePatterns Zinc finger C2H2 type domain signature. 9 29 IPR013087 -
Alju09g0691 475 MobiDBLite consensus disorder prediction 367 410 - -
Alju09g0691 475 MobiDBLite consensus disorder prediction 146 163 - -
Alju09g0691 475 Gene3D Classic Zinc Finger 1 67 - -
Alju09g0691 475 MobiDBLite consensus disorder prediction 39 70 - -
Alju09g0691 475 ProSitePatterns Zinc finger C2H2 type domain signature. 415 435 IPR013087 -
Alju09g0691 475 MobiDBLite consensus disorder prediction 33 70 - -
Alju09g0691 475 ProSitePatterns Zinc finger C2H2 type domain signature. 96 116 IPR013087 -
Alju09g0691 475 ProSiteProfiles Zinc finger C2H2 type domain profile. 413 435 IPR013087 -
Alju09g0691 475 Pfam C2H2-type zinc finger 96 116 - -
Alju09g0691 475 Pfam C2H2-type zinc finger 7 30 - -
Alju09g0691 475 Pfam C2H2-type zinc finger 413 435 - -
Alju09g0691 475 MobiDBLite consensus disorder prediction 373 394 - -
Alju09g0691 475 SMART c2h2final6 413 435 IPR013087 -
Alju09g0691 475 SMART c2h2final6 94 116 IPR013087 -
Alju09g0691 475 SMART c2h2final6 7 29 IPR013087 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju09g0691 Alju-ChrAlju09 11648428 11649855 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju09g0691 5 475 C2H2 Transcription Factor Family AT1G26610 36.128 4.22e-67 220
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Alju09g0691 zf-C2H2_6 2.2e-11 CL0361