Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju09g0642 ATGAGACCGCATGCTTTTTACAATAAATTCATCTATGATGCATTTTGTGAGTGTGTGGGACATTTACTTATTGAAACCCTCATGGCTCCCGATGCAACCCTTAATCCAAGAGTTGCCAAGGCCTTCAGCGCCATGAATGACTTGGGAATTTCTCGTGATGAAGTGGAACCGGTGTTGCAAGAGCTGTTAAGATTGTATGATAAGAAATGGGAATATATTGAAGAAGATAACTATCGGACACTTGTAGATGCATACTTTGAGCTTAAGGAAGATAAGGAAGCAAAAGGTAAAAGAAAAGCTCTCATCAGTTGTAATGGAGGAGAAAGAAAAACTCAACCATTGGCAGATGAAGATGATGTGCAATTGTTAACCATGGACAACTCAAGACAAATTTTAGCTACAGAAAAGAATGGAACGCCTCTAAATGCTTCTGGACGGGAAATCATTGAATCATCTCACTGTTTGATGAGCAATACGAGACCGAAAATCGGTCCTCAATCATTGAAAACAAGGATTAGCGGGGTAGAGAGGATATCGAAGTTGCCTCGCACGGCCGTTACAGATAGAAAATCAAATTCCGAGAAAGAATCTTCTGCAAGGCATGCGGAAGACCCTGTTGATAAGCCTAGCTCTGCTCCTATTCGAAGAGAAAATATACCAAATGGACATTGTAGGAAGGAGATGATAAAACCAAGAACTGGACACACCAATTTACATCTTGGATCCAGTTCAACAAGTTGCAGAGGTCCATCTGAGGTTATGACTAATCATCCATTCATACGTGTGGAATCTGTGGATTTGGATCTGAACAGTGTCATTGACGATTCTACGCATAATGACAGCCCCACAAGCAGCAAGGCTAATATTGACATTGCCTCTTCACCATCGGGAGAAGTGAAAATTTCCTTAAACTGTGGCCGCGCACTTAGACAGCCAAACTACAATATTCCAAGTTTAAATGCTGTTATGAAGTTAGAGGAGAAGCACCTTAAGTCTAGCAATATTGTAGGACCCGAATTTTCTATGGTGAATGCATTAAATGGTTTGTGTGAGAATTTCCTTAAATTGGGCATGAATACAAATAAAACATGTTCACATCCTGAGTTTAACAATGCAACCAGATTAACAAATGGCCCACAAGAAGCTTTTCCTCAAGATGATAGGAAGCTATTTCAGTTTCTTAGTGACATAACAAAAGGCTCGGAAAAGGTGAAGATATCTTTGATAGATGAGTATGGTAGTGGGGAATTACCAAAGTTTAATTACATACCACATAATCTAATATATCAGAGTGCAAATGTAAATATTTCACTGGCTCGTATAGCGGATGAAGGTTGCTGCTCAAATTGTATAGGAGACTGTCTTTCCCAATCATTACCTTGTGCATGTGCTCAAGAAACTGGTGGAGAGTTTCCTTACACGGTGCAGGGCTTGTTGAAAGACGAATTTCTGACATCTTGCATGTCAATGAAACTGGAACCTCAAGCTCATCAATTGGTGTACTGTCAAGAGTGCCCACTAGAGAGGTCTAAGAATGAATTCATGCCTGAGCAATGCAAGGGGCACCTGATCAGGAAGTTCATTAAGGAATGTTGGAGGAAATGTGGATGTGACATGCAGTGTGGAAATCGTATAGTGTTCTTTACCGGTGGAGAAAAGGGCTGGGGCCTTAGAACACTGGAAGATTTGCCTAGGGGATCCTTTGTATGTGAATATGTCGGCGAAATATTAACCAACATGGAGTTGTATGAAAGAATTATGCACAAAAATGGCAATGACAGACATACATATCCTGTAACCCTTGATGCAGACTGGGGTTCAGAAGGTGTTTTAAAGGATGAGGAGGCACTGTGTCTAGATGCCACATATAATGGAAATGTTGCCAGGTTTATCAACCATAGATGCACAGATGCAAATCTGATTGACATTCCCGTTGAAGTGGAGACTCCCGATCGCCATTATTATCATCTTGCCTTCTTCACCAACAAGAAAGTAAGAGCTTATGAGGAGTTGACGTGGGATTATGGCATTGACTTTGATGATCATGATCATCCTATCAAAGCATTCCAATGTTGTTGTGGGAGCCCATTCTGCCATGATAAGAAGCGTAAAGCTTCTTAG 2121 0.4088 MRPHAFYNKFIYDAFCECVGHLLIETLMAPDATLNPRVAKAFSAMNDLGISRDEVEPVLQELLRLYDKKWEYIEEDNYRTLVDAYFELKEDKEAKGKRKALISCNGGERKTQPLADEDDVQLLTMDNSRQILATEKNGTPLNASGREIIESSHCLMSNTRPKIGPQSLKTRISGVERISKLPRTAVTDRKSNSEKESSARHAEDPVDKPSSAPIRRENIPNGHCRKEMIKPRTGHTNLHLGSSSTSCRGPSEVMTNHPFIRVESVDLDLNSVIDDSTHNDSPTSSKANIDIASSPSGEVKISLNCGRALRQPNYNIPSLNAVMKLEEKHLKSSNIVGPEFSMVNALNGLCENFLKLGMNTNKTCSHPEFNNATRLTNGPQEAFPQDDRKLFQFLSDITKGSEKVKISLIDEYGSGELPKFNYIPHNLIYQSANVNISLARIADEGCCSNCIGDCLSQSLPCACAQETGGEFPYTVQGLLKDEFLTSCMSMKLEPQAHQLVYCQECPLERSKNEFMPEQCKGHLIRKFIKECWRKCGCDMQCGNRIVFFTGGEKGWGLRTLEDLPRGSFVCEYVGEILTNMELYERIMHKNGNDRHTYPVTLDADWGSEGVLKDEEALCLDATYNGNVARFINHRCTDANLIDIPVEVETPDRHYYHLAFFTNKKVRAYEELTWDYGIDFDDHDHPIKAFQCCCGSPFCHDKKRKAS 706
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju09g0642 706 SMART set_7 543 682 IPR001214 GO:0005515
Alju09g0642 706 MobiDBLite consensus disorder prediction 236 251 - -
Alju09g0642 706 PANTHER INACTIVE HISTONE-LYSINE N-METHYLTRANSFERASE SUVR1-RELATED 28 705 - -
Alju09g0642 706 MobiDBLite consensus disorder prediction 182 211 - -
Alju09g0642 706 SMART preset_2 394 536 IPR007728 GO:0005634|GO:0008270|GO:0034968|GO:0042054
Alju09g0642 706 Pfam Ubiquitin-binding WIYLD domain 37 90 IPR018848 -
Alju09g0642 706 SUPERFAMILY SET domain 404 698 IPR046341 -
Alju09g0642 706 ProSiteProfiles Histone-lysine N-methyltransferase (EC 2.1.1.43) family profile. 9 704 IPR025776 -
Alju09g0642 706 MobiDBLite consensus disorder prediction 179 251 - -
Alju09g0642 706 FunFam SET-domain containing protein lysine methyltransferase family protein 397 701 - -
Alju09g0642 706 CDD SET_SETDB-like 418 676 - -
Alju09g0642 706 Gene3D - 24 91 IPR043017 -
Alju09g0642 706 Pfam Pre-SET motif 397 544 IPR007728 GO:0005634|GO:0008270|GO:0034968|GO:0042054
Alju09g0642 706 ProSiteProfiles SET domain profile. 543 676 IPR001214 GO:0005515
Alju09g0642 706 Gene3D SET domain 397 701 IPR046341 -
Alju09g0642 706 Pfam SET domain 554 676 IPR001214 GO:0005515
Alju09g0642 706 MobiDBLite consensus disorder prediction 219 233 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju09g0642 Alju-ChrAlju09 10608439 10613976 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju09g0642 528 676 C2H2 Transcription Factor Family AT2G23740 38.365 1.08e-24 108
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Alju09g0642 Pre-SET 5.5e-17 No_clan