Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju09g0638 ATGAACCTGGAAGAGAAAGTGAGCATGGACTTGGTTCAACCATCTGAACACTACTGCTATGTCCGTTGCAACTTCTGCAACACAGTGCTTGCGGTTGGGATTCCATGCAAGAGGCTGTTGGACACAGTGACAGTGAAGTGTGGGCATTGTAGCAACCTGTCCTTCCTCAGCACCAGGCCTCCTTCTCCTTCGCATCACAGCCACAACAACGAAACCCATCATCATCATGATCATAATAATACTATTGATCACACACTCACCCTTCAGGTGCAGGGTTTTTATGGTGATTACAAAAAGGGACAAGCGTCGTCTTCGTCTTCATCCTCCACCTCCTTAACTATGTCCAATGATCCAGGCTCCCCCAAGGCCGCACCTTTTGTTGTCAAACCTCCTGAGAAGAAACACCGACTTCCTTCGGCTTACAATCGCTTCATGAAAGAGGAGATACAGCGCATCAAAGAAGCCAACCCTGAGATTCCTCATCGGGAAGCTTTCAGCGCAGCTGCAAAAAATTGGGCAAGGTACATTCCAAATTCTCCAAGCACTTCACTTTCAGCAAGTAAGAATAAGTTATTGGCTAGGGTTGAAGTCAGTGCAACCTACAGGAATTTACTTGATCAATATGCAGATGAGTCTAAAGAAGGGATTGTAGACAACTTCTAA 663 0.46 MNLEEKVSMDLVQPSEHYCYVRCNFCNTVLAVGIPCKRLLDTVTVKCGHCSNLSFLSTRPPSPSHHSHNNETHHHHDHNNTIDHTLTLQVQGFYGDYKKGQASSSSSSSTSLTMSNDPGSPKAAPFVVKPPEKKHRLPSAYNRFMKEEIQRIKEANPEIPHREAFSAAAKNWARYIPNSPSTSLSASKNKLLARVEVSATYRNLLDQYADESKEGIVDNF 220
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju09g0638 220 FunFam protein CRABS CLAW isoform X3 127 187 - -
Alju09g0638 220 Gene3D High mobility group box domain 117 210 IPR036910 -
Alju09g0638 220 Pfam YABBY protein 14 175 IPR006780 GO:0007275
Alju09g0638 220 MobiDBLite consensus disorder prediction 99 118 - -
Alju09g0638 220 CDD HMG-box_SF 136 172 - -
Alju09g0638 220 MobiDBLite consensus disorder prediction 99 133 - -
Alju09g0638 220 SUPERFAMILY HMG-box 120 173 IPR036910 -
Alju09g0638 220 MobiDBLite consensus disorder prediction 58 79 - -
Alju09g0638 220 PANTHER PROTEIN YABBY 6-RELATED 13 189 IPR006780 GO:0007275
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju09g0638 Alju-ChrAlju09 10530973 10536981 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju09g0638 1 191 C2C2-YABBY Transcription Factor Family AT1G69180 60.513 5.51e-68 205
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-YABBY Alju09g0638 YABBY 7.4e-57 CL0114