Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju09g0636 ATGAAATCTTGGAGTTATCTCTCAGAAGAGAAAGGCTATTTGATTTCTGATGAGATGGATTTTTCGCTCGAAGCTTTTATGAGAGGCAAAAAAGGCAACGAATCTTGTAACTTGGAGAGAGATGGATTTGGTTCTAGCGTTGGGGAAGCTAAAAGCATGAAAGGTTTTGACCTGGGATTTCATGACTTGTTTCATAATGAGCTAGATAGAAATCATAGTAAAAGAGTGGCTTCCTCTACCAATGTTATTGCCATAGATTCATCTTTTGCAGAACAAGAATCTCAGCCAATGTTTTTAGGTTCTCTAGTTGAATCTAAAAGTCCCAATTCATCATCACTGATTGATTTGAAGCTAGGGAGAATATCAGATTGTAATAAAGATGCAAGTAGTGATAAAATTGCAAGGAGAGCTCGGTCTTCCGGTTCACCATCTCAAACACCTTTTTGTCAAGTTTATGGTTGTAGCATGGATCTTAGCTTCTCAAAAGAGTACCACCAAAGGCATAGGGTTTGTGATGCTCACTCCAAGACAGCCAAAGTTATTGTTAATGGCATTGAGCAGAGGTTTTGTCAGCAGTGTAGCAGGTTCCATTTGCTAGCTGAGTTTGATGAGGGCAAGCGCAGTTGTCGCAGACGTCTAGCTGGACACAATCAACGCAGAAGGAAGCCTCAGTTTGATTACTTATCTGGTGAACCCTACAAGATGCTCCAGTTACATCAAGGTACCAAATGTCCTGAGGCTTCATTTCAGAAGACACCCCAGTTTGCCTCACAAGACATGATCAGTTGTGGCATTTTGTATGAACAAACCGATCTCGACATCACTCCTCATGGGAGCTGTGCTCTCTCTCTTCTGTCAGTTAAGTTGCAGAACCCGCCATGCCAATCGGCAGGAAACCCGGGACCTAGTTCCCATGCTTGTCGCACCATCTACGTCAACCACACCGATGAACAAGTTTCCAAAATAATACATTTGGGCACAAACCCTGTGGACAAGTATGGGGAAAACGAGTCATCATCACAACAACATGGATTGAGCTCCATGGAAGCTATCAAGAATGGATCCATATTACTTTCTAATACTGATAATGCTCATAGTCTTCAGGTTTGTCAAACATCAGAATTATTGGATACCAAACACTATGATTCACCTGAGGATGGAGCCACTGTTGATCTATTGCAATTGTCTTCACATCTTCAAAGGGTAGAGCATCAGAGGAATTCATTTCTTCAGTGA 1236 0.4183 MKSWSYLSEEKGYLISDEMDFSLEAFMRGKKGNESCNLERDGFGSSVGEAKSMKGFDLGFHDLFHNELDRNHSKRVASSTNVIAIDSSFAEQESQPMFLGSLVESKSPNSSSLIDLKLGRISDCNKDASSDKIARRARSSGSPSQTPFCQVYGCSMDLSFSKEYHQRHRVCDAHSKTAKVIVNGIEQRFCQQCSRFHLLAEFDEGKRSCRRRLAGHNQRRRKPQFDYLSGEPYKMLQLHQGTKCPEASFQKTPQFASQDMISCGILYEQTDLDITPHGSCALSLLSVKLQNPPCQSAGNPGPSSHACRTIYVNHTDEQVSKIIHLGTNPVDKYGENESSSQQHGLSSMEAIKNGSILLSNTDNAHSLQVCQTSELLDTKHYDSPEDGATVDLLQLSSHLQRVEHQRNSFLQ 411
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju09g0636 411 ProSiteProfiles Zinc finger SBP-type profile. 146 223 IPR004333 GO:0003677
Alju09g0636 411 Gene3D - 139 210 IPR036893 GO:0003677|GO:0005634
Alju09g0636 411 FunFam Squamosa promoter-binding-like protein 14 140 210 - -
Alju09g0636 411 PANTHER SQUAMOSA PROMOTER-BINDING-LIKE PROTEIN 4 96 318 IPR044817 GO:0003677
Alju09g0636 411 Pfam SBP domain 149 222 IPR004333 GO:0003677
Alju09g0636 411 SUPERFAMILY SBT domain 147 228 IPR036893 GO:0003677|GO:0005634
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju09g0636 Alju-ChrAlju09 10474293 10479822 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju09g0636 114 407 SBP-box Gene Family AT1G69170 41.104 2.49e-53 181
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF SBP Alju09g0636 SBP 9.2e-31 No_clan