Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju09g0561 ATGAAAAGAAGAGAAGATTTTTCTTTCTCCATTTCAGCTTTCTTCATCATCATCATCTTCTGCACTTCAGTATCTGGCTTGCTTTCTTCTAAAGGTGTCAACAATGAAGTACAAGCTCTTATAGGAATTAAAAGTTCTTTAAAGGATCCCAACAATGCCCTTCATAACTGGGATATGTATGAAGTGGAACCTTGTAACTGGGCTTTCATATCTTGCAGAGATGGTTCTGTGATTACCCTGGAATTTCCAAGCCAGAACTTTTCTGGTTCTCTTTCCCCAAGCATTAGCAACTTAACCAATCTCATCACTCTGAGTCTGCAAGGTAATAATATAACAGGACCAATTCCTTCTGAGATTGGGATGATGCAAAAGCTTCAAACTCTTGATCTTTCTCATAATTCCTTCACTGGTCAACTTCCAGAGAGTCTCTCCCACACGAAGAGTCTCAATTATCTGAGGCTGAACAATAATAGTCTTATAGGACCAATACCTTCCTCTTTGGCTCACATGACCCACCTTGCTATTCTGGATATATCTTATAATAACTTGAGTGGACCTCTACCTACAATAAATGCAAAAACATTCAATCTTGTAGGAAATCCCCTGATTTGTGCCAGTGGAACTGACCAACATTGCTTCAGAACAACACAACTTTCTACTTATTTTAATAACTCTCAAGGTTCACAAGCCACCAGTAAACAAAAGGATCACAAACTTGTCTTGGCACTTGCTTTAACAGTAAGCTGTATCAGCTTACTAACTCTGGTATTTGGCTTCCTCTGGTGGAGACAAAGATCAAGCAAACAAGTTTTCTCTGACATTAATGAACAAAAGCAAGAAGATGTGAGCCTTGGAAACTTGAGGAAGTTCCACATAAGAGAACTCGAGGTTGCGACGAACAAGTTCAGCAGCAAGAACTTGGTTGGTAAAGGAGGATATGGGAATGTGTACAAAGGCTATCTATCAGATGGTGGGGTCATAGCTGTGAAAAGGCTTAGAGATGGAAGTGCCATTACAGGGGAAATTCAGTTTCAGACTGAAGTTGAGATGATCAGCCTCGCTGTACATCGAAACTTGCTTCGTCTCTATGGATACTGCATCACTCCTACAGAGAGACTCTTAGTTTATCCTTTCATGTCCAATGGTAGTGTTGCTTCTCGTCTCAAAGTGAAGCCTGCTTTAGAGTGGAGCACAAGGAAGAGGATAGCTTTGGGAGCAGCAAGAGGGTTAGTATACCTACATGAGCAATGTGATCCCAAAATTATTCATAGGGATGTGAAGGCTGCAAATATATTGCTTGATGAGTATTGTGAAGCTGTGGTTGGGGATTTCGGGTTGGCTAAGTTGTTAGATCACAGGGACTCACATGTCACCACAGCTGTTCGAGGCACTGTTGGCCATATAGCACCAGAGTACCTCTCAACAGGCCAATCTTCTGATAAAACTGATGTCTTTGGCTTTGGCATTCTTCTCCTTGAACTCATCTCCGGCCGTACAGCTCTTGAATTTGGAAAAGCAGCTAACCAGAAAGGAGCCATGCTCGATTGGGTGAAGAAAATGCATCAAGAGAAGAAACTTGACTTGTTGATTGACAAGGACCTTAGGAACAACTATGACAGAATCGAGCTTGAAGAAATGGTTCGTATAGCACTCTTGTGTACCCAGTATCTTCCAGCTCATAGACCCAAAATGTCTGAAGTGGTTAGAATGCTTGAAGGAGATGGCCTTGCAGAGAAATGGGAAGCTTCAAAGGGATCATCTGAATCAACAAGGAGCAGAGCAAATGAGCTATCTTCTTCAGAACGCTACTCCGATCTCACGGACGATTCTACACTGTTTAATCAGGCCATGGAGCTTTCTGGTCCCAGGTGA 1872 0.4204 MKRREDFSFSISAFFIIIIFCTSVSGLLSSKGVNNEVQALIGIKSSLKDPNNALHNWDMYEVEPCNWAFISCRDGSVITLEFPSQNFSGSLSPSISNLTNLITLSLQGNNITGPIPSEIGMMQKLQTLDLSHNSFTGQLPESLSHTKSLNYLRLNNNSLIGPIPSSLAHMTHLAILDISYNNLSGPLPTINAKTFNLVGNPLICASGTDQHCFRTTQLSTYFNNSQGSQATSKQKDHKLVLALALTVSCISLLTLVFGFLWWRQRSSKQVFSDINEQKQEDVSLGNLRKFHIRELEVATNKFSSKNLVGKGGYGNVYKGYLSDGGVIAVKRLRDGSAITGEIQFQTEVEMISLAVHRNLLRLYGYCITPTERLLVYPFMSNGSVASRLKVKPALEWSTRKRIALGAARGLVYLHEQCDPKIIHRDVKAANILLDEYCEAVVGDFGLAKLLDHRDSHVTTAVRGTVGHIAPEYLSTGQSSDKTDVFGFGILLLELISGRTALEFGKAANQKGAMLDWVKKMHQEKKLDLLIDKDLRNNYDRIELEEMVRIALLCTQYLPAHRPKMSEVVRMLEGDGLAEKWEASKGSSESTRSRANELSSSERYSDLTDDSTLFNQAMELSGPR 623
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju09g0561 623 ProSiteProfiles Protein kinase domain profile. 302 557 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju09g0561 623 SUPERFAMILY Protein kinase-like (PK-like) 287 573 IPR011009 -
Alju09g0561 623 ProSitePatterns Serine/Threonine protein kinases active-site signature. 421 433 IPR008271 GO:0004672|GO:0006468
Alju09g0561 623 Pfam Protein kinase domain 303 569 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju09g0561 623 Gene3D Transferase(Phosphotransferase) domain 1 379 590 - -
Alju09g0561 623 ProSitePatterns Protein kinases ATP-binding region signature. 308 330 IPR017441 GO:0005524
Alju09g0561 623 Pfam Leucine rich repeat 124 183 IPR001611 GO:0005515
Alju09g0561 623 Pfam Leucine rich repeat N-terminal domain 34 72 IPR013210 -
Alju09g0561 623 SUPERFAMILY L domain-like 34 197 - -
Alju09g0561 623 FunFam Somatic embryogenesis receptor-like kinase 1 379 591 - -
Alju09g0561 623 PANTHER SOMATIC EMBRYOGENESIS RECEPTOR KINASE 1 17 582 - -
Alju09g0561 623 Gene3D Ribonuclease Inhibitor 32 214 IPR032675 -
Alju09g0561 623 MobiDBLite consensus disorder prediction 579 623 - -
Alju09g0561 623 Gene3D Phosphorylase Kinase; domain 1 271 378 - -
Alju09g0561 623 MobiDBLite consensus disorder prediction 587 617 - -
Alju09g0561 623 FunFam Somatic embryogenesis receptor kinase 1 271 378 - -
Alju09g0561 623 FunFam LRR receptor-like serine/threonine-protein kinase ERL1 33 193 - -
Alju09g0561 623 SMART serkin_6 302 571 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju09g0561 Alju-ChrAlju09 8531653 8536167 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju09g0561 13 623 Receptor kinase-like Gene Family AT5G16000 67.680 0.0 853
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-II Alju09g0561 Pkinase 1.1e-41 CL0016