Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju09g0512 ATGGCAACTACCACTCTTGCAATAATCTCCAGATTTTCTTCTCTATTGTTCACCATGCTCTTCAACTACCTCAAACTAGCTTCGTCCCATTTTAAATGGGGTTTAGAGTGTCTTCTTTACCACCCATTTTACAGCCTTCGTCTTCATCATCATCAACCTCTTCAAGAGATTCATCAGATCTTTACAGAAGAAGAACAAGTGGAGATATGGCATCCACGTGAAGGAGGAGCAGAAGAAGTGGATTGTGCAGTGTGTTTGAACAAGATTGGTGAAGGAGATGAAGTTAGAGTGTTGAGATGCGAACATGTTTTTCATAGAGAATGTTTGAATCAATGGGTTGGTCTCAGGAACTTTACTTGTCCTCTTTGTCGGCACTTTCTGGGTTCTGGGTTTGGGTCTGTTGTTAATGGTGATGGAGGAGAAGCACTTCATGTGCTTTTCTTTAAGTTTTCTTCATTCTCTGATAATTCTGATGAGCGTGATAACTGGTGGCTACGGTGA 501 0.4132 MATTTLAIISRFSSLLFTMLFNYLKLASSHFKWGLECLLYHPFYSLRLHHHQPLQEIHQIFTEEEQVEIWHPREGGAEEVDCAVCLNKIGEGDEVRVLRCEHVFHRECLNQWVGLRNFTCPLCRHFLGSGFGSVVNGDGGEALHVLFFKFSSFSDNSDERDNWWLR 166
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju09g0512 166 SMART ring_2 82 123 IPR001841 -
Alju09g0512 166 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 60 128 IPR013083 -
Alju09g0512 166 ProSiteProfiles Zinc finger RING-type profile. 82 124 IPR001841 -
Alju09g0512 166 SUPERFAMILY RING/U-box 64 128 - -
Alju09g0512 166 PANTHER RING ZINC FINGER PROTEIN-RELATED 63 127 - -
Alju09g0512 166 CDD RING-H2 82 124 - -
Alju09g0512 166 Pfam Ring finger domain 81 124 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju09g0512 Alju-ChrAlju09 7660746 7661246 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju09g0512 81 129 C3H Transcription Factor Family AT1G15100 61.224 1.98e-15 67.8