Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju09g0510 ATGACTAGTGTTCCAGTAATCATGAAATTTTCTATTCAACTATTCACAATGCTCTTCAACTTCCTCAAACTAGCTTCTCAACATTTCAAATGGTTCATAGAATTCATCACCTACCACCCATTTCACAGCCTGCGTGTTCATCATCCTCATCATCAACCTTTTCTTCAAGAGTTAGAGATGTTCACAGAAGAAGAAGAACGAGTCGAAATATGGCGTCCTCGCGAAGGAGGAGGAGGAGAAGAAGTGGATTGTGCAGTGTGTCTGAGCAAGATTGGTGAAGGAGATGAGGTTAGAGTGCTGAGATGTGAACATGTTTTTCATAGAGGTTGTTTGAATCAATGGATTGGTCTCAGGAACTATACTTGTCCTCTTTGCAGGGACTCTCTGGGAGGAACAAGACGTGTGATTTTCTGTGGGTTTTCTTCTGAGACTCATCATGATCGTGAGAATTGGTGGCTTCGCTAA 465 0.4215 MTSVPVIMKFSIQLFTMLFNFLKLASQHFKWFIEFITYHPFHSLRVHHPHHQPFLQELEMFTEEEERVEIWRPREGGGGEEVDCAVCLSKIGEGDEVRVLRCEHVFHRGCLNQWIGLRNYTCPLCRDSLGGTRRVIFCGFSSETHHDRENWWLR 154
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju09g0510 154 SUPERFAMILY RING/U-box 83 129 - -
Alju09g0510 154 ProSiteProfiles Zinc finger RING-type profile. 84 126 IPR001841 -
Alju09g0510 154 PANTHER RING ZINC FINGER PROTEIN-RELATED 56 130 - -
Alju09g0510 154 SMART ring_2 84 125 IPR001841 -
Alju09g0510 154 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 62 131 IPR013083 -
Alju09g0510 154 Pfam Ring finger domain 83 126 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju09g0510 Alju-ChrAlju09 7602147 7602611 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju09g0510 17 129 C3H Transcription Factor Family AT1G15100 36.842 1.71e-16 70.1