Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju09g0509 ATGACCACTATTGGTGAAATAATCACCAGATTTTTCATCCTACTATTCACCATGCCCTTCAACTTCCTCAGGCTAGCTTTGTCCCATTTCAAATGGGTTTTAGAGTTCCTTGTTTATCACCCATTTTACAGCCTTCATCATCATCAACCTCTTCAAGAGTTTCAGATATTTACAGAAGAAGAAGAACCAGGAAAGATATGGCATCCTCGCGAAGGAGAAGAAGAAGAAGTGGATTGTGCAGTGTGTCTGAACAAGATTGGTGAAGGAGATGAAGTTAGAGTTCTTAGGTGTGAACATGTTTTTCATAGAGATTGTTTGAATCAATGGGTTGGTCTCAGGAACTTTACCTGTCCTCTTTGTAGGGACTTTCTGGGTTCTAGCAACCGGGTTGTTAATGGAAGACAAGTACATGTGCTTTTCTTTAAGTTTTCTTCATTCTCTGATAATTCTGATGAGCGTGATAACTGGTGGCTACGAACTGCTGCTGCAGAAGTGAGAAGCCTCTGGAAGGATGAGTGGGGAAGAGTGGAGTGGTGGAAGCCTAGATGTCGCCGTCTTGCGGTAGGTGAGGTGAATCACTCTCGTCGCTCGCGTCTCCGTTCTGGTTCTTCGTCTTCCAGGCGCCTCTCCTCTGGTTATCACCTCTCCGTCAGGCTCGCTGGTGTCAGTCTCCATCTTCGTCTGATGCCCGGCTTTTGTTTTGTGCTTCTATCGCCATTGCTGAACTTGGGTGTAACAGATCAAGATGAACATGCATATGTGCTTGCATTTGCTTTTCTTGTCTGCCTGCATTCTAAAGTTTAA 804 0.4465 MTTIGEIITRFFILLFTMPFNFLRLALSHFKWVLEFLVYHPFYSLHHHQPLQEFQIFTEEEEPGKIWHPREGEEEEVDCAVCLNKIGEGDEVRVLRCEHVFHRDCLNQWVGLRNFTCPLCRDFLGSSNRVVNGRQVHVLFFKFSSFSDNSDERDNWWLRTAAAEVRSLWKDEWGRVEWWKPRCRRLAVGEVNHSRRSRLRSGSSSSRRLSSGYHLSVRLAGVSLHLRLMPGFCFVLLSPLLNLGVTDQDEHAYVLAFAFLVCLHSKV 267
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju09g0509 267 ProSiteProfiles Zinc finger RING-type profile. 79 121 IPR001841 -
Alju09g0509 267 Pfam Ring finger domain 78 121 IPR001841 -
Alju09g0509 267 CDD RING-H2 79 121 - -
Alju09g0509 267 SUPERFAMILY RING/U-box 70 126 - -
Alju09g0509 267 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 58 126 IPR013083 -
Alju09g0509 267 PANTHER - 7 136 - -
Alju09g0509 267 SMART ring_2 79 120 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju09g0509 Alju-ChrAlju09 7529116 7534398 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju09g0509 78 130 C3H Transcription Factor Family AT1G15100 58.491 1.04e-14 68.2